[MINC-users] TIFF to MINC?

[Robert D. Vincent]

Gabriel,

I would try extracting the TIFF pixels using something like imagemagick,
then use rawtominc to convert to minc.

    -bert

On Mon, Dec 5, 2016 at 2:11 PM, Sulantha Sanjeewa <sulantha.s at gmail.com>
wrote:

> I haven’t done it but probably pyminc would be able to help.
> Opena dummy MINC file.
> Replace the internal data structure from the new matrix made from your
> images.
> Write back
>
> Should work (theoretically at least)
> Sulantha.
>
>
> On December 5, 2016 at 1:11:42 PM, Gabriel A. Devenyi (
> gabriel.devenyi at mcgill.ca) wrote:
>
> I've got my hands on some autofluorescence data from a two-photon
> microscope that I'd like to convert into a MINC volume. Right now I have a
> stack aligned TIFF files.
>
> Has anyone tried something like this before and can share their process,
> otherwise, I'll try and document the final conversion process I figure out.
>
> Thanks.
>
> --
> Gabriel A. Devenyi B.Eng. Ph.D.
> Research Computing Associate
> Computational Brain Anatomy Laboratory
> Cerebral Imaging Center
> Douglas Mental Health University Institute
> McGill University
> t: 514.761.6131x4781
> e: gabriel.devenyi at mcgill.ca
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