[MINC-users] Minc Flood Fill

[Andrew Janke]

mincmorph doesn't do this specifically but in a way the algorithm is
already there with the grouping function (Borgefors algorithm).

   https://github.com/BIC-MNI/minc-tools/blob/master/progs/mincmorph/kernel_ops.c#L469

Depends on how much code you want to write!


a

On 4 August 2016 at 05:13, Gabriel A. Devenyi <gdevenyi at gmail.com> wrote:
> ANTs has some fill through masks functionality in ImageMath, which might be
> what you're looking for. Its included with minc-toolkit-v2
>
>
>
> On Mon, Jul 25, 2016, 14:01 Andrew Wood <andrew at biospective.com> wrote:
>
>> Hi all,
>>
>> I'm wondering if a minc tool exists that can do a flood fill operation. It
>> would take:
>>   1) an image
>>   2) a label volume, defining seed regions
>>   3) a threshold, defining the "aggressiveness" of the fill
>>
>> Display can do it ("set threshold" and "label fill" in the Segmenting
>> menu), but of course requires a human user; I was hoping for a tool that
>> could be used in an automated pipeline.
>>
>> Thanks,
>> Andrew
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>>
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