[MINC-users] nii2mnc - Analyze - Bad header size

[Robert D. Vincent]

Hi all,

Sorry about that. There was some old code in there to convert Analyze but
it had not been tested lately. I just fixed it and verified that it
converts the files I just downloaded from LONI. I pushed the fix to the
develop branch of https://github.com/BIC-MNI/minc-tools

I'll add a TODO to write some regression tests for this...

    -bert

On Thu, Apr 7, 2016 at 8:59 AM, Pedro Telles Cougo Pinto <
ptcougopinto at gmail.com> wrote:

> Dear all
>
> I’m trying to convert some DTI white matter data from Analyze format, with
> the following message. (Data downloaded from LONI:
> http://loni.usc.edu/atlases/).
>
> ptcougopinto$ nii2mnc ICBM_DTI_81_WMPM.img icbm_dti_81_wmpm.mnc
> Bad header size!!
> orient = 0
> <nifti_image
>   nifti_type = 'ANALYZE-7.5'
>   header_filename = 'ICBM_DTI_81_WMPM.hdr'
>   image_filename = 'ICBM_DTI_81_WMPM.img'
>   image_offset = '0'
>   ndim = '4'
>   nx = '181'
>   ny = '217'
>   nz = '181'
>   nt = '1'
>   dx = '1'
>   dy = '1'
>   dz = '1'
>   dt = '1'
>   datatype = '2'
>   datatype_name = 'UINT8'
>   nvox = '7109137'
>   nbyper = '1'
>   byteorder = 'LSB_FIRST'
>   descrip = '/usr/local/air-5.2.5_64_8/bin/reorient'
>   num_ext = '0'
> />
> Segmentation fault: 11
> _______________________________________________
> MINC-users at bic.mni.mcgill.ca
> http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
>