[MINC-users] Fixing wrapped-around MINC files

Gabriel A. Devenyi gdevenyi at gmail.com
Sat May 23 20:36:22 EDT 2015


Cheers, I'll give that a try!

-- 
Gabriel A. Devenyi B.Eng. Ph.D.
Research Computing Associate
Computational Brain Anatomy Laboratory
Cerebral Imaging Center
Douglas Mental Health University Institute
McGill University
t: 514.761.6131x4781
e: gdevenyi at gmail.com

On Fri, May 22, 2015 at 10:33 PM, Andrew Janke <a.janke at gmail.com> wrote:

> Hi Gabriel,
>
> Script is here:
>
>    https://github.com/BIC-MNI/minc-widgets/blob/master/volunfold/volunfold
>
> YMWV but at least you can make use of the mincreshape logic to fix
> your files up if needs be.
>
>
> a
>
> On 23 May 2015 at 10:19, Andrew Janke <a.janke at gmail.com> wrote:
> > hi Gabriel,
> >
> > I have a Perl script called volunfold that fixes this semi magically.
> I'll
> > put it up on github when I get home for you.
> >
> > a
> >
> > On 23/05/2015 3:28 AM, "Gabriel A. Devenyi" <gdevenyi at gmail.com> wrote:
> >>
> >> Hi all,
> >>
> >> I have a collection of minc files which for some reason have their data
> >> wrapped around one of the dimensions (i.e the brain is on the edge of
> the
> >> volume and the other half is on the opposite side)
> >>
> >> Is there a way I can edit the minc properties to fix this? Thanks!
> >>
> >> --
> >> Gabriel A. Devenyi B.Eng. Ph.D.
> >> Research Computing Associate
> >> Computational Brain Anatomy Laboratory
> >> Cerebral Imaging Center
> >> Douglas Mental Health University Institute
> >> McGill University
> >> t: 514.761.6131x4781
> >> e: gdevenyi at gmail.com
> >> _______________________________________________
> >> MINC-users at bic.mni.mcgill.ca
> >> http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
> _______________________________________________
> MINC-users at bic.mni.mcgill.ca
> http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
>


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