[MINC-users] Segmentation on cygwin

[Paul GRAVEL]

Once again you saved the day, many thanks Vlad!

Best,

Paul
ps. I think for N# you meant: https://github.com/BIC-MNI/N3 ;-)!


On Wed, 13 May 2015, Vladimir S. FONOV wrote:

> nu_estimate, nu_correct, nu_evaluate is part of N3
> https://github.com/BIC-MNI/classify
> classify_clean is in classify https://github.com/BIC-MNI/classify
>
> On Wed, May 13, 2015 at 12:13 PM, Paul GRAVEL <pgravel at bic.mni.mcgill.ca>
> wrote:
>
>> Dear all,
>>
>> I am trying to run the old segmentation pipeline, i.e. using:
>> 1) mritotal (linear)
>> 2) nu_estimate, nu_evaluate (or nu_correct)
>> 3) mritotal (non_lin)
>> 4) mincresample to STX
>> 5) classify_clean
>> 6) stx_segment
>>
>> on my machine using cygwin (I know CIVET does great things, but I would
>> like to be able to run a few segmentations locally).
>>
>> However, I don't have the nu_estimate, nu_evaluate and/or nu_correct
>> binaries, nor the one for classify_clean. So I was wondering if I could get
>> them from somewhere, or at least the source (I checked on GitHub, but
>> couldn't find anything).
>> Any ideas?
>>
>> Many thanks!
>>
>> Paul
>> _______________________________________________
>> MINC-users at bic.mni.mcgill.ca
>> http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
>>
>
>
>
> -- 
> Best regards,
>
> Vladimir S. Fonov ~ vladimir <dot> fonov <at> gmail <dot> com
> _______________________________________________
> MINC-users at bic.mni.mcgill.ca
> http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
>