[MINC-users] Jacobian-modulated Resampling

Andrew Wood andrew at biospective.com
Tue Sep 17 15:43:11 EDT 2013


Thanks, Vladimir. I think that's exactly what I wanted.

ICYI, here is a description of what I meant by Jacobian modulation:
http://dbm.neuro.uni-jena.de/vbm/segmentation/modulation/

- Andrew


On Tue, Sep 17, 2013 at 3:00 PM, Vladimir S. FONOV <vladimir.fonov at gmail.com
> wrote:

> Hello,
>
> I suppose this code will do the trick for optimized VBM:
> https://github.com/vfonov/bic-**pipelines/blob/master/bin/**
> pipeline_smooth.pl<https://github.com/vfonov/bic-pipelines/blob/master/bin/pipeline_smooth.pl>
>
>
>
> On 13-09-17 02:35 PM, Jason Lerch wrote:
>
>> I for one don't understand the question. To me the answer to the question:
>>
>>> a script that takes a volume and an xfm as input, and
>>> outputs a deformed/modulated volume.
>>>
>>
>> is mincresample, but I must be missing something …
>>
>> Jason
>>
>> On 2013-09-17, at 12:07 PM, Andrew Wood <andrew at biospective.com> wrote:
>>
>>  Hi All,
>>>
>>> I'd like to study the effects of modulating data that goes though
>>> non-linear spacial normalization. Before I possibly reinvent the wheel,
>>> does anybody know of code out there that turns the process into a black
>>> box? I can imagine a script that takes a volume and an xfm as input, and
>>> outputs a deformed/modulated volume.
>>>
>>
>
> --
> Best regards,
>
>  Vladimir S. FONOV ~ vladimir.fonov <at> gmail.com
> ______________________________**_________________
> MINC-users at bic.mni.mcgill.ca
> http://www.bic.mni.mcgill.ca/**mailman/listinfo/minc-users<http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users>
>


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