[MINC-users] Library not loaded: libminc2.2.dylib

[Vladimir S. FONOV]

Hello,

Display usually dies when the volume have zero voxels everywhere.

On 13-11-18 02:16 PM, Sandra Sanabria wrote:
> It was empty, I set it to:
> DYLD_LIBRARY_PATH=${DYLD_LIBRARY_PATH}:/opt/minc/lib:/opt/minc/lib/InsightToolkit
>
> (not sure why if I  run execute source /opt/minc/minc-toolkit-config.sh)
>
> I can use rawtominc but, although display opens, it dies when opening the file:
>
> display test.mnc
> Input test.mnc
> Objects input.
> display(90923,0x7fff736e1180) malloc: *** mmap(size=18446744065119621120) failed (error code=12)
> *** error: can't allocate region
> *** set a breakpoint in malloc_error_break to debug
> Error reallocing -2147482740 elements of size 4.
>      Source position: /Users/vfonov/src/minc-toolkit/bicpl/Numerical/histogram.c:174
> Segmentation fault: 11
>
>
> (I wish I hadn’t gone Mountain Lion!)
>
> Thanks
>
>
>
> On Nov 18, 2013, at 9:09 AM, "Vladimir S. FONOV" <vladimir.fonov at gmail.com> wrote:
>
>> Ok,
>>
>>
>> what about DYLD_LIBRARY_PATH environment variable, what does
>>
>> echo $DYLD_LIBRARY_PATH shows?
>>
>>
>>
>> On 13-11-18 03:10 AM, Sandra Sanabria wrote:
>>> Hello,
>>>
>>> $ which rawtominc
>>> /opt/minc/bin/rawtominc
>>>
>>>
>>> $ otool -L /opt/minc/bin/rawtominc
>>> /opt/minc/bin/rawtominc:
>>> 	libminc2.2.dylib (compatibility version 2.0.0, current version 2.2.0)
>>> 	/usr/lib/libSystem.B.dylib (compatibility version 1.0.0, current version 169.3.0)
>>>
>>> This is the fool message when trying to use rawtominc:
>>> $ rawtominc -input tmpfile.img -ofloat -transverse -float  -xstep 1.084170 -ystep 1.084170 -zstep 1.211500 tmpfile.mnc 1 63 128 128 -range 0 3.398243
>>> dyld: Library not loaded: libminc2.2.dylib
>>>    Referenced from: /opt/minc/bin/rawtominc
>>>    Reason: image not found
>>> Trace/BPT trap: 5
>>>
>>> Thanks,
>>> S
>>> On Nov 15, 2013, at 3:22 PM, "Vladimir S. FONOV" <vladimir.fonov at gmail.com> wrote:
>>>
>>>> Hello,
>>>>
>>>> what's the output of
>>>>
>>>> which rawtominc
>>>> and
>>>> otool -L /opt/minc/bin/rawtominc
>>>>
>>>> ?
>>>>
>>>>
>>>> On 13-11-15 05:36 PM, Sandra Sanabria wrote:
>>>>> Yes, I did. Should I set any other env variable or add any other folder to the path?
>>>>>
>>>>> Thank you
>>>>>
>>>>> Sandra
>>>>>
>>>>> Enviado desde mi iPhone
>>>>>
>>>>>> El Nov 15, 2013, a las 14:19, "Vladimir S. FONOV" <vladimir.fonov at gmail.com> escribió:
>>>>>>
>>>>>> Hello,
>>>>>>
>>>>>> did you run execute source /opt/minc/minc-toolkit-config.sh
>>>>>> command before trying to run rawtominc ?
>>>>>>
>>>>>>> On 13-11-15 05:07 PM, Sandra Sanabria wrote:
>>>>>>> I’m on MAC OSX 10.8.3 and tried to install the MINC Tool Kit following the directions in http://www.bic.mni.mcgill.ca/ServicesSoftware/ServicesSoftwareMincToolKit. However, when I try to run “rawtominc” I get the following error message: dyld: Library not loaded: libminc2.2.dylib
>>>>>>> Any help with this will be very appreciated!
>>>>>>


-- 
Best regards,

  Vladimir S. FONOV ~ vladimir.fonov <at> gmail.com