[MINC-users] MINC-users Digest, Vol 87, Issue 1

[Thomas Funck]

Hi Vladimir,

I am attempting to compile EBTKS-1.6.4 on arch linux. 

Best,

Thomas
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Subject: MINC-users Digest, Vol 87, Issue 1

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Today's Topics:

   1. EBTKS compilation issue (Thomas Funck)
   2. Re: EBTKS compilation issue (Vladimir S. FONOV)


----------------------------------------------------------------------

Message: 1
Date: Wed, 10 Oct 2012 16:19:40 +0000
From: Thomas Funck <thomas.funck at mail.mcgill.ca>
To: "minc-users at bic.mni.mcgill.ca" <minc-users at bic.mni.mcgill.ca>
Subject: [MINC-users] EBTKS compilation issue
Message-ID:
        <53F3FD0032C9CC4BA836E8F0FC2890650BCEF8 at EXMBX2010-4.campus.MCGILL.CA>
Content-Type: text/plain; charset="us-ascii"

Hi,

I'm trying to compile the EBTKS libraries and I'm coming up against the following errors after running make. Any ideas what is causing this? Configure seems to run fine.

I had a similar "memcpy was not declared in scope" error when compiling Array.cc, which I solved by adding "#include <string.h>" to Array.cc. Not sure what to do in this case though.

Thanks for any help!

Thomas

templates/CachedArray.cc:1084:1:   required from here
templates/CachedArray.cc:870:3: error: 'extrema' was not declared in this scope, and no declarations were found by argument-dependent lookup at the point of instantiation [-fpermissive]
templates/CachedArray.cc:870:3: note: declarations in dependent base 'SimpleArray<char>' are not found by unqualified lookup
templates/CachedArray.cc:870:3: note: use 'this->extrema' instead
templates/CachedArray.cc:897:3: error: 'removeAllNotIn' was not declared in this scope, and no declarations were found by argument-dependent lookup at the point of instantiation [-fpermissive]
templates/CachedArray.cc:897:3: note: declarations in dependent base 'SimpleArray<char>' are not found by unqualified lookup
templates/CachedArray.cc:897:3: note: use 'this->removeAllNotIn' instead
templates/CachedArray.cc: In instantiation of 'Type CachedArray<Type>::_histMedian(unsigned int, unsigned int) [with Type = float]':
templates/CachedArray.cc:1085:1:   required from here
templates/CachedArray.cc:870:3: error: 'extrema' was not declared in this scope, and no declarations were found by argument-dependent lookup at the point of instantiation [-fpermissive]
templates/CachedArray.cc:870:3: note: declarations in dependent base 'SimpleArray<float>' are not found by unqualified lookup
templates/CachedArray.cc:870:3: note: use 'this->extrema' instead
templates/CachedArray.cc:897:3: error: 'removeAllNotIn' was not declared in this scope, and no declarations were found by argument-dependent lookup at the point of instantiation [-fpermissive]
templates/CachedArray.cc:897:3: note: declarations in dependent base 'SimpleArray<float>' are not found by unqualified lookup
templates/CachedArray.cc:897:3: note: use 'this->removeAllNotIn' instead

------------------------------

Message: 2
Date: Wed, 10 Oct 2012 12:25:31 -0400
From: "Vladimir S. FONOV" <vladimir.fonov at gmail.com>
To: MINC users mailing list <minc-users at bic.mni.mcgill.ca>
Subject: Re: [MINC-users] EBTKS compilation issue
Message-ID:
        <CAMCwi7OwvnnCf7A+PUDA-EmxhVpSusiXWpJOQQ4v61TRkcDQ9g at mail.gmail.com>
Content-Type: text/plain; charset=ISO-8859-1

Hello Thomas,

which version of EBTKS are you compiling and also what environment
(i,e os, version of compiler etc.)

On Wed, Oct 10, 2012 at 12:19 PM, Thomas Funck
<thomas.funck at mail.mcgill.ca> wrote:
> Hi,
>
> I'm trying to compile the EBTKS libraries and I'm coming up against the following errors after running make. Any ideas what is causing this? Configure seems to run fine.
>
> I had a similar "memcpy was not declared in scope" error when compiling Array.cc, which I solved by adding "#include <string.h>" to Array.cc. Not sure what to do in this case though.
>
> Thanks for any help!
>
> Thomas
>
> templates/CachedArray.cc:1084:1:   required from here
> templates/CachedArray.cc:870:3: error: 'extrema' was not declared in this scope, and no declarations were found by argument-dependent lookup at the point of instantiation [-fpermissive]
> templates/CachedArray.cc:870:3: note: declarations in dependent base 'SimpleArray<char>' are not found by unqualified lookup
> templates/CachedArray.cc:870:3: note: use 'this->extrema' instead
> templates/CachedArray.cc:897:3: error: 'removeAllNotIn' was not declared in this scope, and no declarations were found by argument-dependent lookup at the point of instantiation [-fpermissive]
> templates/CachedArray.cc:897:3: note: declarations in dependent base 'SimpleArray<char>' are not found by unqualified lookup
> templates/CachedArray.cc:897:3: note: use 'this->removeAllNotIn' instead
> templates/CachedArray.cc: In instantiation of 'Type CachedArray<Type>::_histMedian(unsigned int, unsigned int) [with Type = float]':
> templates/CachedArray.cc:1085:1:   required from here
> templates/CachedArray.cc:870:3: error: 'extrema' was not declared in this scope, and no declarations were found by argument-dependent lookup at the point of instantiation [-fpermissive]
> templates/CachedArray.cc:870:3: note: declarations in dependent base 'SimpleArray<float>' are not found by unqualified lookup
> templates/CachedArray.cc:870:3: note: use 'this->extrema' instead
> templates/CachedArray.cc:897:3: error: 'removeAllNotIn' was not declared in this scope, and no declarations were found by argument-dependent lookup at the point of instantiation [-fpermissive]
> templates/CachedArray.cc:897:3: note: declarations in dependent base 'SimpleArray<float>' are not found by unqualified lookup
> templates/CachedArray.cc:897:3: note: use 'this->removeAllNotIn' instead
> _______________________________________________
> MINC-users at bic.mni.mcgill.ca
> http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users



--
Best regards,

 Vladimir S. Fonov ~ vladimir <dot> fonov <at> gmail <dot> com


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