[MINC-users] Compute distance map from BIC .obj file

[Simon Eskildsen]

Hi Ulrik,

You can use scan_object_to_volume from conglomerate and mincchamfer to
get a distance map. Of course the precision will be limited to the
voxel sizes and you will not get a signed distance. By signed you mean
inside / outside the object, right? If the object is closed you'll be
able to generate the sign with surface_mask2, also from conglomerate.

Simon

On Wed, Mar 21, 2012 at 1:43 PM, Ulrik Landberg Stephansen
<usteph08 at student.aau.dk> wrote:
> Hi,
>
> I would like to compute the (signed) distance map from a BIC .obj file based on the sampling options in a template MINC volume and save it as a new MINC volume. I.e. for each voxel in the template volume, compute the shortest distance to the surface of the object and use that value as the grayscale value of the corresponding voxel in the output volume.
>
> Does such a tool exist, or is it possible using a combination of existing tools?
>
> Ulrik
> _______________________________________________
> MINC-users at bic.mni.mcgill.ca
> http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users