[MINC-users] Maximum intensity projection

[francois hebert]

Thanks a lot for all these tricks.

Francois Hebert



2012/6/15 Peter Neelin <peter.neelin at gmail.com>

> On Jun 13, 2012 10:02 PM, "Andrew Janke" <a.janke at gmail.com> wrote:
>
> > On 9 June 2012 01:36, francois hebert <francois.hebert007 at gmail.com>
> wrote:
> > > I would like to do a Maximum Intensity Projection in each orthogonal
> axis.
> > > Is there such tool in the minc library?
> >
> > I know I'm late to party but for the dinosaurs amongst us who don't
> > always play with the new toys you could do this using the basic MINC
> > commands like this (via a perl script):
> > [fancy perl script deleted]
> > &do_cmd('mincmath', '-clobber', '-max', @files, @ARGV[1]);
> >
> > I will admit that doing this in pyminc is whole lot easier!
>
> Wouldn't a -dimension option to mincmath do the same thing but in one line?
> I haven't tested it, so I'm not sure if it will allow accumulating the
> maximum over image dimensions (the original question was for all 3
> orthogonal projections). If it does not, then a mincreshape to re-order the
> dimensions and a mincmath -dimension should do the trick for the other 2
> dimensions.
>
> Peter
> --
> Peter Neelin
> peter.neelin at gmail.com
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