[MINC-users] Can't properly convert nifti to minc

Simon Eskildsen eskild at gmail.com
Mon Sep 12 14:30:11 EDT 2011


Hi Lisa,

What version of minc/hdf5 are you using?
nii2mnc -version

Do you have an example nifti file we can test?

Simon

On Mon, Sep 12, 2011 at 2:13 PM, Lisa F. Akiyama <lrisa87 at uw.edu> wrote:

> Hello MINC experts,
>
> I am having difficulty converting certain nifti files to minc.
> The niti files have the float datatype (bitpix 32).
> Even when I specify -float when running nii2mnc, I get minc images that
> actually look like short data types (please find the screenshot
> here<
> https://picasaweb.google.com/lh/photo/Rs4F9QpNHQ9MzstLDC_gotB0iJqzGfYoF84zUfqtJpk?feat=directlink
> >-
> the left image is the minc output I am getting, the right is the
> original
> nifti file.)
> Any tips on solving this problem?
>
> Thank you.
>
>
> Best,
> Lisa
> _______________________________________________
> MINC-users at bic.mni.mcgill.ca
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>


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