[MINC-users] link problem

Claude LEPAGE claude at bic.mni.mcgill.ca
Thu May 20 11:40:15 EDT 2010


Hi,

This sounds too simple to be true, but can you verify that you are
compiling/linking all in 32 bits or all in 64 bits?

Claude

> Thank you for the help but it seems that the problem comes from the link
> against shared library.
> I'm not sure but I have to dig in.
>
> Francois
>
> 2010/5/19 Alexandre CARMEL-VEILLEUX <acveilleux at mrs.mni.mcgill.ca>
>
> > Maybe try to link in netcdf as well.
> >
> > gcc -g -o Test1 -I/usr/local/bic/include -L/usr/local/bic/lib -lminc2
> > -lhdf5 -lnetcdf ~/Desktop/Test.c
> >
> > Alex
> >
> >
> > On Wed, May 19, 2010 at 09:49:57AM -0400, francois hebert wrote:
> > > Date: Wed, 19 May 2010 09:49:57 -0400
> > > From: francois hebert <francois.hebert007 at gmail.com>
> > > Subject: [MINC-users] link problem
> > > To: MINC users mailing list <minc-users at bic.mni.mcgill.ca>
> > >
> > > Hi All there,
> > >
> > > New in the MINC world, I'm trying to implement C stuffs into MINC. For a
> > > simple test, I implemented a basic C program (Test.c  attached) and tried
> > to
> > > compiled it using a command line found in minc_wikibook as below:
> > >
> > > arsene at balvenie:~$ gcc -g -o Test1 -I/usr/local/bic/include
> > > -L/usr/local/bic/lib -lminc2 -lhdf5 ~/Desktop/Test.c
> > >
> > >
> > > And I've got the following error message:
> > >
> > > /tmp/ccyMXdho.o: In function `main':
> > > /home/arsene/Desktop/Cluster.
> > > c:20: undefined reference to `miopen_volume'
> > > /home/arsene/Desktop/Cluster.c:29: undefined reference to
> > > `miconvert_world_to_voxel'
> > > /home/arsene/Desktop/Cluster.c:40: undefined reference to
> > `miget_real_value'
> > > collect2: ld returned 1 exit status
> > >
> > >
> > > It seems like the program is compiled but links are not performed...
> > > !?!?!?!?
> > >
> > >
> > > What wrong?
> > >
> > >
> > >
> > > Thanks in advance,
> > > _______________________________________________
> > > MINC-users at bic.mni.mcgill.ca
> > > http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
> > _______________________________________________
> > MINC-users at bic.mni.mcgill.ca
> > http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
> >
> _______________________________________________
> MINC-users at bic.mni.mcgill.ca
> http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
>


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