[MINC-users] Selecting a single slice from a mnc volume

Jason Lerch jason at bic.mni.mcgill.ca
Wed May 21 07:19:55 EDT 2008


Hello Ayman,

that depends somewhat on the version of RMINC you are using - but you  
can get a slice directly inside R as well. Use the minc.get.hyperslab  
function (or, in the newest version, mincGetHyperslab).

Otherwise, working outside of R, the mincextract program can do this  
type of stuff.

Cheers,

Jason

On 21-May-08, at 1:01 AM, Ayman Oweida wrote:

>
> This is probably a trivial problem, yet I'm struggling to figure it  
> out.  How can I select a single slice from a 120 slice minc volume?   
> I then want to import this slice into R using RMINC  
> (minc.get.volumes) so I guess I would have to first extract the  
> slice using a minc-related operation, save it and then import it  
> into R.  Any suggestions on what the minc-operation would be?
>
> Thanks,
> Ayman
>
> _______________________________________________
> MINC-users at bic.mni.mcgill.ca
> http://www2.bic.mni.mcgill.ca/mailman/listinfo/minc-users



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