[MINC-users] minc2dicom ?

Andrew Janke a.janke at gmail.com
Thu Oct 19 12:13:54 EDT 2006


> for i in `seq 0 $slices`; do
>     mincpik -scale 1 $infile tmp.rgb
>     mv tmp.rgb tmp.raw
>     dicom2 -d --size=$cols:$rows tmp.raw
>     dcm2v tmp.raw.dcm -o $prefix\_$i.v
> done

Looks good, although I suspect you will want to add a

   -slice $i

to the mincpik line.  Also I think you can do this with Imagemagick:

   mincpik -slice $1 -scale 1 $infile RGB:tmp.raw

and do away with the mv command.  'man ImageMagick' will tell more.


-- 
Andrew Janke   (a.janke at gmail.com || http://a.janke.googlepages.com/)
Canada->Montreal                                   Cell: +1 (514) 924 2012


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