[MINC-users] Problems with Inormalize

[Torsten Ruest]

Dear all,

I experienced some problems using inormalize. I wanted to scale the 
intensity of a MR image according to a "reference" image. However there 
seems something not being OK with this algorithm: although it displays a 
normalization factor at the end, it seems not to apply it to the saved 
image. There is no difference between the intensity non-uniformity 
corrected image (which I did with N3 just before using inormalize) and 
the inormalized image.
Has anybody experienced the same ?

Furthermore, I am wondering on what the scaling in inormalize is based 
on. Given that the 2 images (reference, and image to be scaled according 
to the reference) have the same matrix size, but are not in register, 
would the scale factor be just the same as if the images would be in 
register (assuming that just rotations and translations would need to be 
applied to bring them in the same space)?
Thank you very much for any suggestions.
Regards,

Torsten