[MINC-users] mritotal installation problem - missing average_305* files

[Andre Matos]

Hi Roy,

If I am not wrong, you need to specify the MODELDIR when you are compiling
and installing the "mni_autoreg_model".

I have done for my old Red Hat was:

mni_autoreg_model-1.03

	wget ftp://ftp.bic.mni.mcgill.ca/pub/minc/mni_autoreg_model-1.03
	tar -xvzf mni_autoreg_model-1.03
	cd mni_autoreg_model-1.03
        edit the Makefile:
                prefix = /usr/local/mni/
                MODELDIR = $(prefix)/data/mni_autoreg
	make install

Check if there is any new version of mni_autoreg_model.

My MODELDIR on my MAC is at "/usr/local/mni/data/mni_autoreg"

If this is not the problem, check also if you have all model files in the
directory that you have defined.

Regards,

Andre              

--
Andre Matos
amatos@mrs.mni.mcgill.ca 

-----Original Message-----
From: minc-users-admin@bic.mni.mcgill.ca
[mailto:minc-users-admin@bic.mni.mcgill.ca] On Behalf Of Roy Yves
Sent: Friday, October 22, 2004 6:06 PM
To: minc-users@bic.mni.mcgill.ca
Subject: [MINC-users] mritotal installation problem - missing average_305*
files

Dear minc users:

we installed mritotal on our machines and get the following error:

$ mritotal sub_05_AB_anat.mnc test.xfm
Loading configuration file
/usr/local/mni/autoreg-0.98r/bin/../etc/mni_autoreg/mritotal.cfg
Loading protocol default (protocol file =
/usr/local/mni/autoreg-0.98r/bin/../etc/mni_autoreg/mritotal.default.cfg)
/usr/local/mni/autoreg-0.98r/bin/../share/mni_autoreg/average_305_16_blur.mn
c does not exist
/usr/local/mni/autoreg-0.98r/bin/../share/mni_autoreg/average_305_8_blur.mnc
does not exist
/usr/local/mni/autoreg-0.98r/bin/../share/mni_autoreg/average_305_8_dxyz.mnc
does not exist
/usr/local/mni/autoreg-0.98r/bin/../share/mni_autoreg/average_305_16_mask.mn
c does not exist
/usr/local/mni/autoreg-0.98r/bin/../share/mni_autoreg/average_305_8_mask.mnc
does not exist

Those files actually do not exist but:
$ ls /usr/local/mni/autoreg-0.98r/bin/../share/mni_autoreg/
average_305_headmask.mnc  average_305_mask.mnc  average_305.mnc

these do exist.

Two things:
1- Where can I get the missing ones ?
2- Where can I tell mritotal not to look for the missing ones (and to look
for the ones I have) (IF of course they are not all needed) ?

Many thanks
Yves

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