[MINC-users] MINC 1.3 released

[Adam Thomas]

Indeed, gcc works just fine. I had quickly copied in the environment
variables recommended for compiling netCDF
(http://my.unidata.ucar.edu/content/software/netcdf/INSTALL.html#linux)
and didn't realize I had change my C compiler.

Thanks for the tip,
-a

---
Adam Thomas             adamt@nih.gov
Functional MRI Facility, NIMH/NIH/DHHS
10 Center Dr, Room B1D708A
Bethesda MD. 20892-1148
Phone:301-402-6351    Fax:  301-402-1370


On Thu, 7 Oct 2004, Robert VINCENT wrote:

> Hi Adam,
>
> Try using gcc instead of c99.  c99 turns off the CLK_TCK macro in time.h
> on RedHat and Fedora systems (possibly other Linux boxes as well).
>
> Thanks, I hope this helps.
>
> 	-bert
>
> On Wed, 6 Oct 2004, Adam Thomas wrote:
>
> >
> > I tried to compile MINC 1.3 on Redhat 9 and got the following error:
> >
> > make[2]: Entering directory `/amnt/tungsten1/Apps/minc-build/minc-1.3'
> > if /bin/sh ./libtool --mode=compile /usr/bin/c99 -DHAVE_CONFIG_H -I.
> > -I. -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include
> > -I./progs/Proglib  -I /misc/tungsten1/Apps/MNI-1.3/include  -g -O2 -MT
> > volume_io/Prog_utils/time.lo -MD -MP -MF
> > "volume_io/Prog_utils/.deps/time.Tpo" \
> >   -c -o volume_io/Prog_utils/time.lo `test -f
> > 'volume_io/Prog_utils/time.c' || echo
> > './'`volume_io/Prog_utils/time.c; \
> > then mv "volume_io/Prog_utils/.deps/time.Tpo"
> > "volume_io/Prog_utils/.deps/time.Plo"; \
> > else rm -f "volume_io/Prog_utils/.deps/time.Tpo"; exit 1; \
> > fi
> > /usr/bin/c99 -DHAVE_CONFIG_H -I. -I. -I. -I./libsrc
> > -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I
> > /misc/tungsten1/Apps/MNI-1.3/include -g -O2 -MT
> > volume_io/Prog_utils/time.lo -MD -MP -MF
> > volume_io/Prog_utils/.deps/time.Tpo -c volume_io/Prog_utils/time.c -o
> > volume_io/Prog_utils/time.o
> > volume_io/Prog_utils/time.c: In function `get_clock_ticks_per_second':
> > volume_io/Prog_utils/time.c:58: `CLK_TCK' undeclared (first use in
> > this function)
> > volume_io/Prog_utils/time.c:58: (Each undeclared identifier is
> > reported only once
> > volume_io/Prog_utils/time.c:58: for each function it appears in.)
> > make[2]: *** [volume_io/Prog_utils/time.lo] Error 1
> > make[2]: Leaving directory `/amnt/tungsten1/Apps/minc-build/minc-1.3'
> > make[1]: *** [all-recursive] Error 1
> > make[1]: Leaving directory `/amnt/tungsten1/Apps/minc-build/minc-1.3'
> > make: *** [all] Error 2
> >
> >
> > Seems to not be finding time.h. Has anyone else seen this?
> >
> > Thanks,
> > -a
> >
> > ---
> > Adam Thomas             adamt@nih.gov
> > Functional MRI Facility, NIMH/NIH/DHHS
> > 10 Center Dr, Room B1D708A
> > Bethesda MD. 20892-1148
> > Phone:301-402-6351    Fax:  301-402-1370
> >
> >
> > On Thu, 12 Aug 2004, Robert VINCENT wrote:
> >
> > > Hello minc-users,
> > >
> > > I've placed a new release of MINC, version 1.3, on our usual
> software
> > > distribution sites:
> > >
> > > http://www.bic.mni.mcgill.ca/software/distribution/
> > >
> > > http://www.bic.mni.mcgill.ca/software/minc/
> > >
> > > MINC 1.3 fixes the recently discovered incompatibility with netCDF
> > > 3.5.1,
> > > and fixes one or two other bugs and minor build issues.  One
> potentially
> > > serious bug with minccalc has been fixed, it would affect you if you
> > > use minccalc with MINC files which contain a vector dimension.
> > >
> > > A -version flag has been added to most of the tools.
> > >
> > > See the NEWS and ChangeLog files for additional details.
> > >
> > > MINC 1.3 has been built successfully on Linux (RedHat) and IRIX.
> > >
> > > 	-bert
> > >
> > >
> > >
> > >
> > >
> > > _______________________________________________
> > > MINC-users@bic.mni.mcgill.ca
> > > http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
> > >
> > _______________________________________________
> > MINC-users@bic.mni.mcgill.ca
> > http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
> >
>
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