[MINC-users] mni_perllib-0.07 problem for "make test"

[Andrew Janke]

On Tue, 12 Oct 2004, Yasunari Tosa wrote:

> I encountered problems when I ran "make test" for mni_perllib-0.07.
> I'm perl-handicapped.  Please tell me how to fix.

> # make test
> ...
> t/batch-0........ok
> t/batch-1......../usr/bin/getopt: invalid option -- J
> /usr/bin/getopt: invalid option -- Q
> /usr/bin/getopt: invalid option -- S
> /usr/bin/getopt: invalid option -- s
> /usr/bin/getopt: invalid option -- o
> /usr/bin/getopt: invalid option -- e
> batch: error parsing command-line arguments
> Error closing pipe to batch:
>  at t/batch-1.t line 36

Yasunari,

You can safely ignore this test error, mni_perlib still contains some very MNI
centric code.  In this case code that wrapped up the UCSF batch system that was
running some time ago.  Ideally this code should be removed, but I think
sleeping dogs have been left to lie.

In other words: mni_perllib has a hidden dependency on a working install of UCSF
batch!



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Andrew Janke (rotor@cmr.uq.edu DOT au || www.cmr.uq.edu.au/~rotor)
Australia->University of Queensland->Centre for Magnetic Resonance
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