[MINC-users] histogram and tissue classification

Andrew Janke minc-users@bic.mni.mcgill.ca
Mon Mar 8 18:55:04 2004


On Mon, 8 Mar 2004, Jason Lerch wrote:

> Yup. Open Display, paint the area you are interested in. Go to "slice
> view" (S from top menu). Select H or "Histogram of Label" and the
> histogram will be shown next to the colour bar.

And if you wish a more permanent record of your histogram, use mincstats
ie:

   $ mincstats -histogram file.hist -histogram_bins 2000 infile.mnc

You can also add an optional -mask <mask.mnc>


--
Andrew Janke   ( rotor@cmr.uq.edu.au || www.cmr.uq.edu.au/~rotor )
Australia->University of Queensland->Centre for Magnetic Resonance
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