[MINC-users] Building EBTKS

Beau Sapach beau.sapach@ualberta.ca
Wed Dec 8 06:40:07 2004


Hi everyone,

I'm having some trouble building EBTKS 1.3.  ./configure seems to run just
fine but make fails.  Has anyone seen this before?  Any help would be much
appreciated!  Thanks!

Beau

******** variables ****************

CC=/usr/bin/gcc
CXX=/usr/bin/c++


******** configure output **********

checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking for a BSD-compatible install... /usr/bin/install -c
checking whether ln -s works... yes
checking whether make sets $(MAKE)... (cached) yes
checking for gcc... /usr/bin/gcc
checking for C compiler default output... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables...
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether /usr/bin/gcc accepts -g... yes
checking for /usr/bin/gcc option to accept ANSI C... none needed
checking for style of include used by make... GNU
checking dependency style of /usr/bin/gcc... gcc3
checking whether we are using the GNU C++ compiler... yes
checking whether /usr/bin/c++ accepts -g... yes
checking dependency style of /usr/bin/c++... gcc3
checking how to run the C preprocessor... /usr/bin/gcc -E
checking for egrep... grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking values.h usability... yes
checking values.h presence... yes
checking for values.h... yes
checking malloc.h usability... yes
checking malloc.h presence... yes
checking for malloc.h... yes
checking build system type... i686-pc-linux-gnu
checking host system type... i686-pc-linux-gnu
checking for ld used by GCC... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for /usr/bin/ld option to reload object files... -r
checking for BSD-compatible nm... /usr/bin/nm -B
checking for a sed that does not truncate output... /bin/sed
checking how to recognise dependent libraries... pass_all
checking command to parse /usr/bin/nm -B output... ok
checking dlfcn.h usability... yes
checking dlfcn.h presence... yes
checking for dlfcn.h... yes
checking for ranlib... ranlib
checking for strip... strip
checking for objdir... .libs
checking for /usr/bin/gcc option to produce PIC... -fPIC
checking if /usr/bin/gcc PIC flag -fPIC works... yes
checking if /usr/bin/gcc static flag -static works... yes
checking if /usr/bin/gcc supports -c -o file.o... yes
checking if /usr/bin/gcc supports -c -o file.lo... yes
checking if /usr/bin/gcc supports -fno-rtti -fno-exceptions... yes
checking whether the linker (/usr/bin/ld) supports shared libraries... yes
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking dynamic linker characteristics... GNU/Linux ld.so
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... no
checking whether to build static libraries... yes
creating libtool
checking for finite... yes
checking for isfinite... no
checking for mkstemp... yes
configure: creating ./config.status
config.status: creating Makefile
config.status: creating config.h
config.status: executing depfiles commands


******** make output *************

make  all-am
make[1]: Entering directory `/root/EBTKS-1.3'
if /bin/sh ./libtool --mode=compile /usr/bin/c++ -DHAVE_CONFIG_H -I. -I. -I.
-I./include -I./templates -DUSE_COMPMAT -DUSE_DBLMAT   -g -O2 -MT version.lo
-MD -MP -MF ".deps/version.Tpo" \
  -c -o version.lo `test -f 'version.cc' || echo './'`version.cc; \
then mv ".deps/version.Tpo" ".deps/version.Plo"; \
else rm -f ".deps/version.Tpo"; exit 1; \
fi
/usr/bin/c++ -DHAVE_CONFIG_H -I. -I. -I. -I./include -I./templates
-DUSE_COMPMAT -DUSE_DBLMAT -g -O2 -MT version.lo -MD -MP -MF
.deps/version.Tpo -c version.cc -o version.o
echo timestamp > version.lo
if /bin/sh ./libtool --mode=compile /usr/bin/c++ -DHAVE_CONFIG_H -I. -I. -I.
-I./include -I./templates -DUSE_COMPMAT -DUSE_DBLMAT   -g -O2 -MT FileIO.lo
-MD -MP -MF ".deps/FileIO.Tpo" \
  -c -o FileIO.lo `test -f 'src/FileIO.cc' || echo './'`src/FileIO.cc; \
then mv ".deps/FileIO.Tpo" ".deps/FileIO.Plo"; \
else rm -f ".deps/FileIO.Tpo"; exit 1; \
fi
/usr/bin/c++ -DHAVE_CONFIG_H -I. -I. -I. -I./include -I./templates
-DUSE_COMPMAT -DUSE_DBLMAT -g -O2 -MT FileIO.lo -MD -MP -MF .deps/FileIO.Tpo
-c src/FileIO.cc -o FileIO.o
In file included from ./include/trivials.h:42,
                 from ./templates/SimpleArray.h:23,
                 from ./include/MString.h:24,
                 from ./include/Path.h:23,
                 from ./include/FileIO.h:26,
                 from src/FileIO.cc:21:
./templates/miscTemplateFunc.h: In function `Histogram& add(Histogram&,
const SimpleArray<Type>&)':
./templates/miscTemplateFunc.h:102: error: invalid use of undefined type
`struct Histogram'
./templates/miscTemplateFunc.h:28: error: forward declaration of `struct
Histogram'
In file included from ./include/MString.h:24,
                 from ./include/Path.h:23,
                 from ./include/FileIO.h:26,
                 from src/FileIO.cc:21:
./templates/SimpleArray.h: In member function `unsigned int
SimpleArray<Type>::occurrencesOf(Type) const':
./templates/SimpleArray.h:100: error: `_size' undeclared (first use this
function)
./templates/SimpleArray.h:100: error: (Each undeclared identifier is
reported only once for each function it appears in.)
./templates/SimpleArray.h: In member function `int
SimpleArray<Type>::indexOf(Type, int) const':
./templates/SimpleArray.h:106: error: `_size' undeclared (first use this
function)
./templates/SimpleArray.h: In member function `virtual void
SimpleArray<Type>::qsort(int (*)(const void*, const void*))':
./templates/SimpleArray.h:130: error: `_contents' undeclared (first use this
function)
./templates/SimpleArray.h:130: error: `_size' undeclared (first use this
function)
./templates/SimpleArray.h: In member function `virtual void
SimpleArray<Type>::qsortAscending()':
./templates/SimpleArray.h:132: error: `_contents' undeclared (first use this
function)
./templates/SimpleArray.h:132: error: `_size' undeclared (first use this
function)
./templates/SimpleArray.h: In member function `virtual void
SimpleArray<Type>::qsortDescending()':
./templates/SimpleArray.h:134: error: `_contents' undeclared (first use this
function)
./templates/SimpleArray.h:134: error: `_size' undeclared (first use this
function)
./templates/SimpleArray.h: In member function `double
SimpleArray<Type>::mean() const':
./templates/SimpleArray.h:144: error: `_size' undeclared (first use this
function)
./templates/SimpleArray.h: In member function `SimpleArray<Type>
SimpleArray<Type>::operator-() const':
./templates/SimpleArray.h:190: error: `_size' undeclared (first use this
function)
make[1]: *** [FileIO.lo] Error 1
make[1]: Leaving directory `/root/EBTKS-1.3'
make: *** [all] Error 2