[MINC-users] mni_autoreg compilation failed

[Andre MATOS]

Hi Steve,

the gcc version that I have at home is:
                                                                            
gcc (GCC) 3.2.2 20030222 (Red Hat Linux 3.2.2-5)


Thanks!

Andre
amatos@mrs.mni.mcgill.ca


On Sat, 20 Dec 2003, Steve ROBBINS wrote:

> On Fri, Dec 19, 2003 at 03:53:37PM -0500, Andre MATOS wrote:
> > Hi,
> > 
> > I got this error when I was compiling the mni_autoreg-0.98k:
> > 
> > make[3]: Entering directory 
> > `/scratch/amatos/local/mni_source/mni_autoreg-0.98k/minctracc/Optimize'
> > if gcc -DHAVE_CONFIG_H -I. -I. -I../.. -I./../Include -I../../Proglib   
> > -Df2cFortran -DNDEBUG -I/scratch/amatos/local/mni/include  -O -MT 
> > optimize.o -MD -MP -MF ".deps/optimize.Tpo" \
> >   -c -o optimize.o `test -f 'optimize.c' || echo './'`optimize.c; \
> > then mv -f ".deps/optimize.Tpo" ".deps/optimize.Po"; \
> > else rm -f ".deps/optimize.Tpo"; exit 1; \
> > fi
> > optimize.c: In function `optimize_linear_transformation':
> > optimize.c:732: parse error before `void'
>  
>  
> > Is this related to any required lib?
>  
> No.
> 
> There are two likely possibilities.  First, it is possible that your
> copy of mni_autoreg is corrupted.  Try downloading it again and comparing
> the two copies of optimize.c using diff.
> 
> The second possibility is that declaring a function in the middle of
> another function is a nonstandard extension that has been removed.
> What does "gcc --version" say?  Does the following patch fix the problem?
> 
>  
> --- /home/steve/bicsrc/cvs/registration/mni_autoreg/minctracc/Optimize/optimize.c	2003-07-27 11:30:55.000000000 -0400
> +++ minctracc/Optimize/optimize.c	2003-12-20 07:14:00.000000000 -0500
> @@ -179,6 +179,10 @@
>      amoeba_struct  *amoeba );
>  
>  
> +public void normalize_data_to_match_target(Volume d1, Volume m1, Real thresh1,
> +                                           Volume d2, Volume m2, Real thresh2,
> +                                           Arg_Data *globals);
> +
>  public void make_zscore_volume(Volume d1, Volume m1, 
>  			       Real *threshold); 
>  
> @@ -729,9 +733,6 @@
>  			     __FILE__, __LINE__);
>    }    
>  
> -public void normalize_data_to_match_target(Volume d1, Volume m1, Real thresh1,
> -                                           Volume d2, Volume m2, Real thresh2,
> -                                           Arg_Data *globals);
>  
>    /* --------------------------------------------------------------*/
>    /* -------- prepare the weighting array for optimization --------*/
> 
> 
> 
> -Steve
> 
> 
> _______________________________________________
> MINC-users@bic.mni.mcgill.ca
> http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
> 

-- 
Andre Matos
amatos@mrs.mni.mcgill.ca