[MINC-users] talairach volume and talairach center
CDI HSL - Ressonancia
minc-users@bic.mni.mcgill.ca
Fri, 8 Aug 2003 08:57:46 -0300
This is a multi-part message in MIME format.
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Hi everybody!
I´ve been trying to install Display in a Irix 6.5.8 system but the necessary
libraries (netcdf, minc, opengl) are not possible to install because there
is a missing file called "fec" that should be in the directory
/usr/lib32/cmplrs. The configure log file is attatched, maybe it help you to
help me.
Regards
Mauricio
----- Original Message -----
From: Yasunari Tosa <tosa@nmr.mgh.harvard.edu>
To: <minc-users@bic.mni.mcgill.ca>
Sent: Thursday, August 07, 2003 6:17 PM
Subject: [MINC-users] talairach volume and talairach center
> Hi, MINC people
>
> I'm very confused about the talairach coordinate system
> and I would appreciate it very much if you could clarify.
>
> My question:
> Where is the talairach origin in the talairached volume?
>
> I thought that average_305.mnc is the one aligned with
> talairach map (the web page says that it can be directly
> superimposed over the talairach atlas). Thus I thought
> that this is the "standard" talairached volume.
>
> When I did
>
> worldtovoxel average_305.mnc 0 0 0
>
> returned non-trivial big values compared with the volume size.
>
> 68.25 126.51000000000000512 86.094999999999998863
>
> Here is the MINC linear map stored
>
> MINC Linear Transform
> 1.0000 0.0000 0.0000 -86.0950
> 0.0000 1.0000 0.0000 -126.5100
> 0.0000 0.0000 1.0000 -68.2500
> 0.0000 0.0000 0.0000 1.0000
>
> This means that the average_305 volume center is not the
> talairach origin.
>
> Is this a correct understanding?
>
> Thank you.
>
> Tosa
>
>
> _______________________________________________
> MINC-users@bic.mni.mcgill.ca
> http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
>
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filename="config.log"
This file contains any messages produced by compilers while=0A=
running configure, to aid debugging if configure makes a mistake.=0A=
=0A=
configure:928: checking for top-level source-directory=0A=
configure:938: checking for m4 preprocessor=0A=
configure:945: checking for m4=0A=
configure:1012: checking m4 flags=0A=
configure:1040: checking for xlc=0A=
configure:1085: checking C compiler "c89"=0A=
configure:1094: c89 -c -O -DNDEBUG conftest.c 1>&5=0A=
No such feature exists (-5,116)=0A=
=0A=
The MIPSpro C Compiler =0A=
(license FEATURE string =3D cc) =0A=
requires a license password. =0A=
=0A=
For license installation and trouble shooting =0A=
information visit the web page: =0A=
=0A=
http://www.sgi.com/Support/Licensing/install_docs.html =0A=
=0A=
To obtain a Permanent license (proof of purchase=0A=
required) or an Evaluation license please=0A=
visit our license request web page: =0A=
=0A=
http://www.sgi.com/Products/license.html =0A=
=0A=
or send a blank email message to: =0A=
=0A=
license@sgi.com =0A=
=0A=
In North America, Silicon Graphics' customers may request =0A=
Permanent licenses by sending a facsimile to: =0A=
=0A=
(650) 932-0537 =0A=
=0A=
or by calling our technical support hotline =0A=
=0A=
1-800-800-4SGI =0A=
=0A=
If you are Outside of North America or you are not a Silicon =0A=
Graphics support customer then contact your local support provider. =0A=
=0A=
cc-3450 fec: INTERNAL =0A=
open_message_catalog: cannot open message catalog file=0A=
=0A=
=0A=
1 catastrophic error detected in the compilation of "conftest.c".=0A=
Compilation aborted.=0A=
configure: failed program was:=0A=
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int main() {=0A=
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; return 0; }=0A=
configure:1121: checking how to make dependencies=0A=
configure:1189: checking for CC=0A=
configure:1225: checking C++ compiler "CC"=0A=
configure:1243: CC -o conftest -DNDEBUG conftest.C 1>&5=0A=
No such feature exists (-5,116)=0A=
=0A=
The MIPSpro C++ Compiler =0A=
(license FEATURE string =3D cpp) =0A=
requires a license password. =0A=
=0A=
For license installation and trouble shooting =0A=
information visit the web page: =0A=
=0A=
http://www.sgi.com/Support/Licensing/install_docs.html =0A=
=0A=
To obtain a Permanent license (proof of purchase=0A=
required) or an Evaluation license please=0A=
visit our license request web page: =0A=
=0A=
http://www.sgi.com/Products/license.html =0A=
=0A=
or send a blank email message to: =0A=
=0A=
license@sgi.com =0A=
=0A=
In North America, Silicon Graphics' customers may request =0A=
Permanent licenses by sending a facsimile to: =0A=
=0A=
(650) 932-0537 =0A=
=0A=
or by calling our technical support hotline =0A=
=0A=
1-800-800-4SGI =0A=
=0A=
If you are Outside of North America or you are not a Silicon =0A=
Graphics support customer then contact your local support provider. =0A=
=0A=
CC ERROR: cannot exec /usr/lib32/cmplrs/fecc=0A=
configure: failed program was:=0A=
#line 1230 "configure"=0A=
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configure:1294: checking how to run the C preprocessor=0A=
configure:1475: checking for f77=0A=
configure:1516: f77 -c conftest.f=0A=
No such feature exists (-5,116)=0A=
=0A=
The MIPSpro Fortran 77 Compiler =0A=
(license FEATURE string =3D f77) =0A=
requires a license password. =0A=
=0A=
For license installation and trouble shooting =0A=
information visit the web page: =0A=
=0A=
http://www.sgi.com/Support/Licensing/install_docs.html =0A=
=0A=
To obtain a Permanent license (proof of purchase=0A=
required) or an Evaluation license please=0A=
visit our license request web page: =0A=
=0A=
http://www.sgi.com/Products/license.html =0A=
=0A=
or send a blank email message to: =0A=
=0A=
license@sgi.com =0A=
=0A=
In North America, Silicon Graphics' customers may request =0A=
Permanent licenses by sending a facsimile to: =0A=
=0A=
(650) 932-0537 =0A=
=0A=
or by calling our technical support hotline =0A=
=0A=
1-800-800-4SGI =0A=
=0A=
If you are Outside of North America or you are not a Silicon =0A=
Graphics support customer then contact your local support provider. =0A=
=0A=
f77 ERROR: cannot exec /usr/lib32/cmplrs/mfef77=0A=
configure:1548: checking for Fortran .F compiler=0A=
configure:1589: checking for Fortran preprocessor=0A=
configure:1669: checking for xlf90=0A=
configure:1669: checking for f90=0A=
configure:1700: checking Fortran-90 compiler "f90"=0A=
configure:1702: f90 -o conftest conftest.f90 =0A=
No such feature exists (-5,116)=0A=
=0A=
The MIPSpro Fortran 90 Compiler =0A=
(license FEATURE string =3D f90) =0A=
requires a license password. =0A=
=0A=
For license installation and trouble shooting =0A=
information visit the web page: =0A=
=0A=
http://www.sgi.com/Support/Licensing/install_docs.html =0A=
=0A=
To obtain a Permanent license (proof of purchase=0A=
required) or an Evaluation license please=0A=
visit our license request web page: =0A=
=0A=
http://www.sgi.com/Products/license.html =0A=
=0A=
or send a blank email message to: =0A=
=0A=
license@sgi.com =0A=
=0A=
In North America, Silicon Graphics' customers may request =0A=
Permanent licenses by sending a facsimile to: =0A=
=0A=
(650) 932-0537 =0A=
=0A=
or by calling our technical support hotline =0A=
=0A=
1-800-800-4SGI =0A=
=0A=
If you are Outside of North America or you are not a Silicon =0A=
Graphics support customer then contact your local support provider. =0A=
=0A=
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configure:1751: checking for nm utility=0A=
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configure:2824: checking for strerror=0A=
configure:2877: checking for working ftruncate()=0A=
configure:2930: c89 -o conftest -O -DNDEBUG conftest.c 1>&5=0A=
No such feature exists (-5,116)=0A=
=0A=
The MIPSpro C Compiler =0A=
(license FEATURE string =3D cc) =0A=
requires a license password. =0A=
=0A=
For license installation and trouble shooting =0A=
information visit the web page: =0A=
=0A=
http://www.sgi.com/Support/Licensing/install_docs.html =0A=
=0A=
To obtain a Permanent license (proof of purchase=0A=
required) or an Evaluation license please=0A=
visit our license request web page: =0A=
=0A=
http://www.sgi.com/Products/license.html =0A=
=0A=
or send a blank email message to: =0A=
=0A=
license@sgi.com =0A=
=0A=
In North America, Silicon Graphics' customers may request =0A=
Permanent licenses by sending a facsimile to: =0A=
=0A=
(650) 932-0537 =0A=
=0A=
or by calling our technical support hotline =0A=
=0A=
1-800-800-4SGI =0A=
=0A=
If you are Outside of North America or you are not a Silicon =0A=
Graphics support customer then contact your local support provider. =0A=
=0A=
cc-3450 fec: INTERNAL =0A=
open_message_catalog: cannot open message catalog file=0A=
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1 catastrophic error detected in the compilation of "conftest.c".=0A=
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=0A=
The MIPSpro C Compiler =0A=
(license FEATURE string =3D cc) =0A=
requires a license password. =0A=
=0A=
For license installation and trouble shooting =0A=
information visit the web page: =0A=
=0A=
http://www.sgi.com/Support/Licensing/install_docs.html =0A=
=0A=
To obtain a Permanent license (proof of purchase=0A=
required) or an Evaluation license please=0A=
visit our license request web page: =0A=
=0A=
http://www.sgi.com/Products/license.html =0A=
=0A=
or send a blank email message to: =0A=
=0A=
license@sgi.com =0A=
=0A=
In North America, Silicon Graphics' customers may request =0A=
Permanent licenses by sending a facsimile to: =0A=
=0A=
(650) 932-0537 =0A=
=0A=
or by calling our technical support hotline =0A=
=0A=
1-800-800-4SGI =0A=
=0A=
If you are Outside of North America or you are not a Silicon =0A=
Graphics support customer then contact your local support provider. =0A=
=0A=
cc-3450 fec: INTERNAL =0A=
open_message_catalog: cannot open message catalog file=0A=
=0A=
=0A=
1 catastrophic error detected in the compilation of "conftest.c".=0A=
Compilation aborted.=0A=
configure: failed program was:=0A=
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