[MINC-development] weird minc 2 bug

Jonathan HARLAP jharlap at bic.mni.mcgill.ca
Wed Jun 7 12:48:56 EDT 2006


Here's a neat one:

Take a CDF file, run it through mincconvert -2 to get the corresponding 
HDF file.  Now open both file in register (or just use 
mincinfo/mincheader).  You'll see that the dimension order is, as it 
should be, identical.

Now, the fun part.  Run mincinfo -dimnames on the two files, and observe 
the different dimension order.

This fun bug is great in that it's a subtle little glitch in mincinfo, 
but affects many little programs, such as mni-perllib's 
MNI::MincUtilities::get_dimension_order()

Example output below.

Cheers,
J


% mincinfo  m?.mnc
file: m1.mnc
image: signed__ short 0 to 4095
image dimensions: xspace zspace yspace
     dimension name         length         step        start
     --------------         ------         ----        -----
     xspace                    124          1.4        -86.8
     zspace                    256     -1.01562      118.492
     yspace                    256     -1.01562      130.992


file: m2.mnc
image: signed__ short 0 to 4095
image dimensions: xspace zspace yspace
     dimension name         length         step        start
     --------------         ------         ----        -----
     xspace                    124          1.4        -86.8
     zspace                    256     -1.01562      118.492
     yspace                    256     -1.01562      130.992


% mincinfo -dimnames m?.mnc
xspace zspace yspace


xspace yspace zspace





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