From richard.beare at gmail.com Tue Jul 18 22:28:36 2006 From: richard.beare at gmail.com (Richard Beare) Date: Wed, 19 Jul 2006 12:28:36 +1000 Subject: [MINC-development] emma query Message-ID: <779dabeb0607181928h1e75ed89t754fdd4c86cf72@mail.gmail.com> Hi Everyone, I read somewhere the emma is no longer under active development, but was hoping someone might have some advice for building it. I'm using fedora core 3 (32 bit) and matlab 7.1. My trouble seems to be caused by a mismatch between the gcc used to build matlab and the one on the system - Invalid MEX-file '/import/local32/matlab7_1/toolbox/emma/miinquire.mexglx': /import/local32/matlab7_1/bin/glnx86/../../sys/os/glnx86/libgcc_s.so.1: version `GCC_3.3' not found (required by /usr/lib/libstdc++.so.6). I'm not sure why libstdc++ is involved at all. Any suggestions? From a.janke at gmail.com Wed Jul 19 09:16:31 2006 From: a.janke at gmail.com (Andrew Janke) Date: Wed, 19 Jul 2006 09:16:31 -0400 Subject: [MINC-development] emma query In-Reply-To: <779dabeb0607181928h1e75ed89t754fdd4c86cf72@mail.gmail.com> References: <779dabeb0607181928h1e75ed89t754fdd4c86cf72@mail.gmail.com> Message-ID: Hi Richard, It looks to me from the errors that you are correct, MATLAB was compiled with gcc 3.3 or above and it itself would use c++ (thus the error). The only way I can see around this is to install gcc 3.3 as this would seem to be a requirement of MATLAB. a On 7/18/06, Richard Beare wrote: > Hi Everyone, > > I read somewhere the emma is no longer under active development, but > was hoping someone might have some advice for building it. I'm using > fedora core 3 (32 bit) and matlab 7.1. My trouble seems to be caused > by a mismatch between the gcc used to build matlab and the one on the > system - > > Invalid MEX-file > '/import/local32/matlab7_1/toolbox/emma/miinquire.mexglx': > /import/local32/matlab7_1/bin/glnx86/../../sys/os/glnx86/libgcc_s.so.1: > version `GCC_3.3' not found (required by /usr/lib/libstdc++.so.6). > > I'm not sure why libstdc++ is involved at all. > > Any suggestions? > _______________________________________________ > MINC-development mailing list > MINC-development at bic.mni.mcgill.ca > http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-development > -- Andrew Janke (a.janke at gmail.com || http://a.janke.googlepages.com/) Canada->Montreal Cell: +1 (514) 924 2012 From jgsled at sickkids.ca Thu Jul 27 11:56:11 2006 From: jgsled at sickkids.ca (John G. Sled) Date: Thu, 27 Jul 2006 11:56:11 -0400 Subject: [MINC-development] emma query In-Reply-To: <779dabeb0607181928h1e75ed89t754fdd4c86cf72@mail.gmail.com> References: <779dabeb0607181928h1e75ed89t754fdd4c86cf72@mail.gmail.com> Message-ID: <20060727155610.GD28738@sickkids.ca> Richard, Several years ago I found that Mathworks distributed a version of gcc and libc on their website to address the problem of Matlab lagging behind the libc versions that were current on most linux distributions. Perhaps they still offer this for their current release. with regards, John On Wed, Jul 19, 2006 at 12:28:36PM +1000, Richard Beare wrote: > Hi Everyone, > > I read somewhere the emma is no longer under active development, but > was hoping someone might have some advice for building it. I'm using > fedora core 3 (32 bit) and matlab 7.1. My trouble seems to be caused > by a mismatch between the gcc used to build matlab and the one on the > system - > > Invalid MEX-file > '/import/local32/matlab7_1/toolbox/emma/miinquire.mexglx': > /import/local32/matlab7_1/bin/glnx86/../../sys/os/glnx86/libgcc_s.so.1: > version `GCC_3.3' not found (required by /usr/lib/libstdc++.so.6). > > I'm not sure why libstdc++ is involved at all. > > Any suggestions? > _______________________________________________ > MINC-development mailing list > MINC-development at bic.mni.mcgill.ca > http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-development From richard.beare at gmail.com Thu Jul 27 22:12:58 2006 From: richard.beare at gmail.com (Richard Beare) Date: Fri, 28 Jul 2006 12:12:58 +1000 Subject: [MINC-development] emma query In-Reply-To: <20060727155610.GD28738@sickkids.ca> References: <779dabeb0607181928h1e75ed89t754fdd4c86cf72@mail.gmail.com> <20060727155610.GD28738@sickkids.ca> Message-ID: <779dabeb0607271912v355722bdi26df67cc9dc6ae37@mail.gmail.com> Thanks, I managed to find a solution - I used gcc 3.3 that was shipped as a compatability compiler on fedora core 3. My original error was that I didn't tell mex to use this, only the emma makefile. On 7/28/06, John G. Sled wrote: > > Richard, > > Several years ago I found that Mathworks distributed a version of gcc > and libc on their website to address the problem of Matlab lagging > behind the libc versions that were current on most linux distributions. > Perhaps they still offer this for their current release. > > with regards, > > > John > > > > On Wed, Jul 19, 2006 at 12:28:36PM +1000, Richard Beare wrote: > > Hi Everyone, > > > > I read somewhere the emma is no longer under active development, but > > was hoping someone might have some advice for building it. I'm using > > fedora core 3 (32 bit) and matlab 7.1. My trouble seems to be caused > > by a mismatch between the gcc used to build matlab and the one on the > > system - > > > > Invalid MEX-file > > '/import/local32/matlab7_1/toolbox/emma/miinquire.mexglx': > > /import/local32/matlab7_1/bin/glnx86/../../sys/os/glnx86/libgcc_s.so.1: > > version `GCC_3.3' not found (required by /usr/lib/libstdc++.so.6). > > > > I'm not sure why libstdc++ is involved at all. > > > > Any suggestions? > > _______________________________________________ > > MINC-development mailing list > > MINC-development at bic.mni.mcgill.ca > > http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-development > _______________________________________________ > MINC-development mailing list > MINC-development at bic.mni.mcgill.ca > http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-development >