[MINC-development] minc-patch: fixing check for gunzip

Vicka Corey minc-development@bic.mni.mcgill.ca
Mon, 24 Nov 2003 16:16:55 -0500


got it :)  btw, this is wrong in the ReadMe.rtf document included on 
the cd, so you might want to change it there....

thanks,
--vicka

On Mon, Nov 24, 2003 at 04:03:28PM -0500, Jason Lerch wrote:
> The key is in setting the environment variable PERL5LIB - and, like 
> Sylvain pointed out, ensuring that the leading slash is there for the 
> /usr/local/mni line.
> 
> Cheers,
> 
> Jason
> 
> On Nov 24, 2003, at 3:01 PM, Vicka Corey wrote:
> 
> > i said:
> >> mritotal -verbose -debug -clobber -protocol icbm orig/orig.mnc 
> >> transforms/talairach.xfm
> >> defined(@array) is deprecated at 
> >> /usr/local/mni/lib/mni_autoreg/Startup.pm line 231.
> >>         (Maybe you should just omit the defined()?)
> >> Can't locate Getopt/Tabular.pm in @INC (@INC contains: 
> >> /usr/local/mni/lib/mni_autoreg usr/local/mni/lib/Library/Perl/5.8.1 
> >> /System/Library/Perl/darwin /System/Library/Perl /Library/Perl/darwin 
> >> /Library/Perl /Network/Library/Perl/darwin /Network/Library/Perl .) 
> >> at /usr/local/mni/bin/mritotal line 56.
> >> BEGIN failed--compilation aborted at /usr/local/mni/bin/mritotal line 
> >> 56.
> >> ERROR: mritotal failed
> >> ERROR: talairach exited with non-zero status
> >>
> >> ...is Tabular.pm one of your things, or do i need to get it from some 
> >> other
> >> perl distribution source?  or is there something else going wrong 
> >> here?
> >
> > ...and the odd thing is, Getopt/Tabular.pm is there:
> > ocelot:vicka[161] find /usr -name Tabular.pm -ls
> > 1331082   56 -r--r--r--    1 corey    wheel       26892 Apr  7  1999 
> > /usr/local/mni/lib/Library/Perl/5.8.1/Getopt/Tabular.pm
> > ocelot:vicka[162]
> >
> > ...so now i am rather confused :/
> >
> > --vicka
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