From kristina.drudik at mail.mcgill.ca Tue Feb 13 11:41:56 2024 From: kristina.drudik at mail.mcgill.ca (Kristi Drudik) Date: Tue, 13 Feb 2024 16:41:56 +0000 Subject: [MINC-development] project tmap onto surfaces Message-ID: Hello! Please excuse my ignorance. I have a t-map of functional activity that I would like to project onto a surface reconstruction of individual subjects just for visualization purposes. Right now, I am loading the t-map (minc file) over the volume files (minc) in Display, but the t-map does not project onto the gray/white surface reconstructions (object files). How would one do this? Would I need to convert the t-map into object file and if so, how? Thank you so much for any guidance! Best, Kristi -------------- next part -------------- An HTML attachment was scrubbed... URL: From gdevenyi at gmail.com Tue Feb 13 12:11:44 2024 From: gdevenyi at gmail.com (Gabriel A. Devenyi) Date: Tue, 13 Feb 2024 12:11:44 -0500 Subject: [MINC-development] project tmap onto surfaces In-Reply-To: References: Message-ID: volume_object_evaluate can map an MINC volume onto the nearest surface vertex of a surface, producing a vertex-wise text file containing values which can be displayed on the surface using `Display surface.obj -vertex vertexfile.txt` -- Gabriel A. Devenyi Ph.D. gdevenyi at gmail.com On Tue, Feb 13, 2024 at 11:42?AM Kristi Drudik < kristina.drudik at mail.mcgill.ca> wrote: > Hello! > > > > Please excuse my ignorance. I have a t-map of functional activity that I > would like to project onto a surface reconstruction of individual subjects > just for visualization purposes. Right now, I am loading the t-map (minc > file) over the volume files (minc) in Display, but the t-map does not > project onto the gray/white surface reconstructions (object files). > > > > How would one do this? Would I need to convert the t-map into object file > and if so, how? Thank you so much for any guidance! > > > > Best, > > Kristi > > > > > _______________________________________________ > MINC-development mailing list > MINC-development at bic.mni.mcgill.ca > https://mailman.bic.mni.mcgill.ca/mailman/listinfo/minc-development > -------------- next part -------------- An HTML attachment was scrubbed... URL: From kristina.drudik at mail.mcgill.ca Fri Feb 16 09:21:44 2024 From: kristina.drudik at mail.mcgill.ca (Kristi Drudik) Date: Fri, 16 Feb 2024 14:21:44 +0000 Subject: [MINC-development] MINC-development Digest, Vol 87, Issue 2 In-Reply-To: References: Message-ID: Hi Gabriel, It worked and it is glorious. Thank you very much for taking the time to answer. Best, Kristi -----Original Message----- From: MINC-development On Behalf Of minc-development-request at bic.mni.mcgill.ca Sent: Wednesday, February 14, 2024 12:00 PM To: minc-development at bic.mni.mcgill.ca Subject: MINC-development Digest, Vol 87, Issue 2 Send MINC-development mailing list submissions to minc-development at bic.mni.mcgill.ca To subscribe or unsubscribe via the World Wide Web, visit https://mailman.bic.mni.mcgill.ca/mailman/listinfo/minc-development or, via email, send a message with subject or body 'help' to minc-development-request at bic.mni.mcgill.ca You can reach the person managing the list at minc-development-owner at bic.mni.mcgill.ca When replying, please edit your Subject line so it is more specific than "Re: Contents of MINC-development digest..." Today's Topics: 1. Re: project tmap onto surfaces (Gabriel A. Devenyi) ---------------------------------------------------------------------- Message: 1 Date: Tue, 13 Feb 2024 12:11:44 -0500 From: "Gabriel A. Devenyi" To: "MINC development discussion & planning" Subject: Re: [MINC-development] project tmap onto surfaces Message-ID: Content-Type: text/plain; charset="utf-8" volume_object_evaluate can map an MINC volume onto the nearest surface vertex of a surface, producing a vertex-wise text file containing values which can be displayed on the surface using `Display surface.obj -vertex vertexfile.txt` -- Gabriel A. Devenyi Ph.D. gdevenyi at gmail.com On Tue, Feb 13, 2024 at 11:42?AM Kristi Drudik < kristina.drudik at mail.mcgill.ca> wrote: > Hello! > > > > Please excuse my ignorance. I have a t-map of functional activity that > I would like to project onto a surface reconstruction of individual > subjects just for visualization purposes. Right now, I am loading the > t-map (minc > file) over the volume files (minc) in Display, but the t-map does not > project onto the gray/white surface reconstructions (object files). > > > > How would one do this? Would I need to convert the t-map into object > file and if so, how? Thank you so much for any guidance! > > > > Best, > > Kristi > > > > > _______________________________________________ > MINC-development mailing list > MINC-development at bic.mni.mcgill.ca > https://mailman.bic.mni.mcgill.ca/mailman/listinfo/minc-development > -------------- next part -------------- An HTML attachment was scrubbed... URL: ------------------------------ Subject: Digest Footer _______________________________________________ MINC-development mailing list MINC-development at bic.mni.mcgill.ca https://mailman.bic.mni.mcgill.ca/mailman/listinfo/minc-development ------------------------------ End of MINC-development Digest, Vol 87, Issue 2 ***********************************************