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Hi Cécile,
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<div class="">This is the branch that we are using in the IPMSA project:</div>
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<div class=""><a href="https://github.com/SPINEProject/Loris-MRI/tree/v23.0.3_IPMSA" class="">https://github.com/SPINEProject/Loris-MRI/tree/v23.0.3_IPMSA</a></div>
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<div class="">Best,</div>
<div class="">Alfredo.<br class="">
<div><br class="">
<blockquote type="cite" class="">
<div class="">On Nov 26, 2021, at 9:55 AM, Cecile Madjar <<a href="mailto:cecile.madjar@mcin.ca" class="">cecile.madjar@mcin.ca</a>> wrote:</div>
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<p class=""><span style="padding: 3px 10px; border-radius: 5px; color: #ffffff; font-weight: bold; display: inline-block; background-color: #ff0000;" class=""> External Email - Use Caution </span></p>
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<div dir="ltr" class="">Hi Alfredo,
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<div class="">Could you point me to the version of the code you are using on GitHub so I can take a look at the correct MRI.pm file.</div>
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<div class="">Thank you!</div>
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<div class="">Cécile</div>
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<br class="">
<div class="gmail_quote">
<div dir="ltr" class="gmail_attr">On Thu, Nov 25, 2021 at 8:09 PM Morales Pinzon, Alfredo <<a href="mailto:AMORALESPINZON@bwh.harvard.edu" class="">AMORALESPINZON@bwh.harvard.edu</a>> wrote:<br class="">
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<blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">
<div style="overflow-wrap: break-word;" class="">Hi Cécile,
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</div>
<div class="">I’m getting the following error when inserting a minc file using the
<a href="http://secure-web.cisco.com/1TzLj0luctz8Wb38Vv2psbWhbcU-f__EKvLSSaDYgEXmz5b0aqjDuEoOYgCDeNvO_wd_jY7vbVfBPyzukTp8u3bszcvl9RlzkffyCB96NEJ6ldbRDtpB5Dm1t3H6zAKfXwb47TCFKN4jo2cTx22wsEoMCjd40dMRoMr5y7-MMPE_rF9MBpp5uEB4y849W6nkPHoaERmNpP67XVRUarntyB3RrW-aH-TPtdYKd6qDPGkllZKISL3hlhs7AG4CCOQdZEVjiW6N9fr5aaSxBevb9TptNEJgPfB3dj-0XRNXWAt9bp6fvmGUwjIXEdKZVASmz/http%3A%2F%2Fminc_insertion.pl" target="_blank" class="">
minc_insertion.pl</a> script:</div>
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<div class="">===</div>
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<div style="margin: 0px; font-stretch: normal; font-size: 14px; line-height: normal; font-family: Menlo;" class="">
<div style="margin:0px;font-stretch:normal;line-height:normal" class=""><span style="font-variant-ligatures:no-common-ligatures" class="">$ perl
<a href="http://secure-web.cisco.com/1TzLj0luctz8Wb38Vv2psbWhbcU-f__EKvLSSaDYgEXmz5b0aqjDuEoOYgCDeNvO_wd_jY7vbVfBPyzukTp8u3bszcvl9RlzkffyCB96NEJ6ldbRDtpB5Dm1t3H6zAKfXwb47TCFKN4jo2cTx22wsEoMCjd40dMRoMr5y7-MMPE_rF9MBpp5uEB4y849W6nkPHoaERmNpP67XVRUarntyB3RrW-aH-TPtdYKd6qDPGkllZKISL3hlhs7AG4CCOQdZEVjiW6N9fr5aaSxBevb9TptNEJgPfB3dj-0XRNXWAt9bp6fvmGUwjIXEdKZVASmz/http%3A%2F%2Fminc_insertion.pl" target="_blank" class="">
minc_insertion.pl</a> -profile prod -force -mincPath /data/BGI102001_207019_screening.mnc -verbose -acquisition_protocol t1c -create_minc_pics</span></div>
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<div style="margin: 0px; font-stretch: normal; font-size: 14px; line-height: normal; font-family: Menlo;" class="">
<span style="font-variant-ligatures:no-common-ligatures" class=""><br class="">
</span></div>
<div style="margin: 0px; font-stretch: normal; font-size: 14px; line-height: normal; font-family: Menlo;" class="">
<span style="font-variant-ligatures:no-common-ligatures" class="">DBD::mysql::db do failed: Cannot add or update a child row: a foreign key constraint fails (`IPMSA_LORIS`.`candidate`, CONSTRAINT `FK_candidate_1` FOREIGN KEY (`RegistrationCenterID`) REFERENCES
`psc` (`CenterID`)) at /data_/ipmsa/loris_data/IPMSA/bin/mri/uploadNeuroDB/NeuroDB/MRI.pm line 1018.</span></div>
<div style="margin: 0px; font-stretch: normal; font-size: 14px; line-height: normal; font-family: Menlo;" class="">
<span style="font-variant-ligatures:no-common-ligatures" class=""><br class="">
</span></div>
<div style="margin: 0px; font-stretch: normal; font-size: 14px; line-height: normal; font-family: Menlo;" class="">
<span style="font-variant-ligatures:no-common-ligatures" class="">ERROR: Failed to insert record in table mri_scanner:</span></div>
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<span style="font-variant-ligatures:no-common-ligatures" class=""><br class="">
</span></div>
<div style="margin: 0px; font-stretch: normal; font-size: 14px; line-height: normal; font-family: Menlo;" class="">
<span style="font-variant-ligatures:no-common-ligatures" class="">The following database commands failed:</span></div>
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<span style="font-variant-ligatures:no-common-ligatures" class=""><span style="white-space:pre-wrap" class=""></span>PREPARE s FROM 'INSERT INTO mri_scanner (Serial_number,Software,Manufacturer,Model,CandID) VALUES (?,?,?,?,?)';</span></div>
<div style="margin: 0px; font-stretch: normal; font-size: 14px; line-height: normal; font-family: Menlo;" class="">
<span style="font-variant-ligatures:no-common-ligatures" class=""><span style="white-space:pre-wrap" class=""></span>SET @x1='syngo_MR_2004A_4VA25A',@x2='Siemens',@x3='Sonata',@x4='247660';</span></div>
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<span style="font-variant-ligatures:no-common-ligatures" class=""><span style="white-space:pre-wrap" class=""></span>EXECUTE s USING @x1,@x2,@x3,@x4,@x5;</span></div>
<div style="margin: 0px; font-stretch: normal; font-size: 14px; line-height: normal; font-family: Menlo;" class="">
<span style="font-variant-ligatures:no-common-ligatures" class=""><br class="">
</span></div>
<div style="margin: 0px; font-stretch: normal; font-size: 14px; line-height: normal; font-family: Menlo;" class="">
<span style="font-variant-ligatures:no-common-ligatures" class="">Error obtained:Cannot add or update a child row: a foreign key constraint fails (`IPMSA_LORIS`.`mri_scanner`, CONSTRAINT `FK_mri_scanner_1` FOREIGN KEY (`CandID`) REFERENCES `candidate` (`CandID`))
(error code 1452)</span></div>
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<div class="">===</div>
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<div class="">Could you help me figuring out what is happening? Is there something I should add to the minc headers?</div>
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<div class="">Best,</div>
<div class="">Alfredo.<br class="">
<div class=""><br class="">
</div>
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