<div dir="ltr"><div dir="ltr">Hi Alfredo,<div><br></div><div>I have a feeling you are encountering an issue that was fixed in release 20.2 of LORIS-MRI where DICOM files without the header (0020,0032) were automatically rejected by the script <a href="http://get_dicom_info.pl">get_dicom_info.pl</a> with the error message saying that the file is not a DICOM, while it is actually a DICOM...</div><div><br></div><div>If you don't wish to upgrade your LORIS instance to 20.2 right away, you can take a look at the following PR that solved the issue: <a href="https://github.com/aces/Loris-MRI/pull/365">https://github.com/aces/Loris-MRI/pull/365</a> to implement the fix.</div><div><br></div><div>Hope this helps! Let me know how it goes,</div><div><br></div><div>Cécile</div><div><br></div><div><br></div></div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Mon, Apr 8, 2019 at 6:02 PM Morales Pinzon, Alfredo <<a href="mailto:AMORALESPINZON@bwh.harvard.edu">AMORALESPINZON@bwh.harvard.edu</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">
<div dir="ltr">
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0)">
Dear LoriDev team,</div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0)">
<br>
</div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0)">
Out of 82 MRI sessions that I was uploading into LORIS, 15 could not be uploaded due to the following error:</div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0)">
<br>
</div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0)">
---------------------------------------</div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0)">
<span>Running now the following command: /AAA/loris_data/BBB/bin/mri/uploadNeuroDB/<a href="http://imaging_upload_file.pl" target="_blank">imaging_upload_file.pl</a> -profile prod -upload_id 20844 /AAA/ANOM/STUDYNAME//AAA10026_343633_w024.tar.gz -verbose<br>
</span>
<div><br>
</div>
<div>/AAA/loris_data/IPMSA/bin/mri/dicom-archive/dicomTar.pl /tmp/ImagingUpload-9-29-1gMub2 /AAA/loris_data/BBB/data/tarchive -clobber -database -profile prod -verbose<br>
</div>
<div> Source: /tmp/ImagingUpload-9-29-1gMub2<br>
</div>
<div>Target: /AAA/loris_data/BBB/data/tarchive<br>
</div>
<div><br>
</div>
<div>Testing for database connectivity.<br>
</div>
<div>Database is available.<br>
</div>
<div><br>
</div>
<div> The target directory does not contain a single DICOM file.<br>
</div>
<div><br>
</div>
<span>The dicomtar execution has failed</span><br>
</div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0)">
<span style="font-family:Calibri,Arial,Helvetica,sans-serif;background-color:rgb(255,255,255);display:inline">---------------------------------------</span><br>
</div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0)">
<span style="font-family:Calibri,Arial,Helvetica,sans-serif;background-color:rgb(255,255,255);display:inline"><br>
</span></div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0)">
<span style="font-family:Calibri,Arial,Helvetica,sans-serif;background-color:rgb(255,255,255);display:inline">I checked the file <span style="font-family:Calibri,Arial,Helvetica,sans-serif;background-color:rgb(255,255,255);display:inline">/AAA/ANOM/STUDYNAME//AAA10026_343633_w024.tar.gz
and it has dicom files in it. Is there something a need to double check?</span></span></div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0)">
<span style="font-family:Calibri,Arial,Helvetica,sans-serif;background-color:rgb(255,255,255);display:inline"><span style="font-family:Calibri,Arial,Helvetica,sans-serif;background-color:rgb(255,255,255);display:inline"><br>
</span></span></div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0)">
<span style="font-family:Calibri,Arial,Helvetica,sans-serif;background-color:rgb(255,255,255);display:inline"><span style="font-family:Calibri,Arial,Helvetica,sans-serif;background-color:rgb(255,255,255);display:inline">Best
regards,</span></span></div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0)">
<span style="font-family:Calibri,Arial,Helvetica,sans-serif;background-color:rgb(255,255,255);display:inline"><span style="font-family:Calibri,Arial,Helvetica,sans-serif;background-color:rgb(255,255,255);display:inline">Alfredo.</span></span></div>
<div id="gmail-m_-2215723190222808066signature">
<div class="gmail-m_-2215723190222808066BodyFragment"></div>
</div>
</div>
_______________________________________________<br>
Loris-dev mailing list<br>
<a href="mailto:Loris-dev@bic.mni.mcgill.ca" target="_blank">Loris-dev@bic.mni.mcgill.ca</a><br>
<a href="https://mailman.bic.mni.mcgill.ca/mailman/listinfo/loris-dev" rel="noreferrer" target="_blank">https://mailman.bic.mni.mcgill.ca/mailman/listinfo/loris-dev</a><br>
</blockquote></div>