[Loris-dev] upgrading LORIS v22 - v23 error

Tom Beaudry waveflux at gmail.com
Mon Feb 8 12:49:37 EST 2021 

Hi  DAve and Shen,

I wasn't able to rollback my version of composer so it made me realize it
was corrupt, so i removed composer, reinstalled it and rolled back to the
version you suggest.  Now i can do composer insall with no problem, and
make clean & make work without errors.

The only error i'm left with now when i visit the main page is:

[Mon Feb 08 12:47:27.785383 2021] [php7:error] [pid 7082] [client
172.16.253.8:54598] PHP Fatal error:  Uncaught  --> Smarty: unable to write
file /var/www/loris/smarty/templates_c/wrt6021792fbfb5b4_53411590 <-- \n
 thrown in
/var/www/loris/vendor/smarty/smarty/libs/sysplugins/smarty_internal_runtime_writefile.php
on line 60

Thanks!
Tom

[Mon Feb 08 12:47:27.785383 2021] [php7:error] [pid 7082] [client
172.16.253.8:54598] PHP Fatal error:  Uncaught  --> Smarty: unable to write
file /var/www/loris/smarty/templates_c/wrt6021792fbfb5b4_53411590 <-- \n
 thrown in
/var/www/loris/vendor/smarty/smarty/libs/sysplugins/smarty_internal_runtime_writefile.php
on line 60

On Fri, Feb 5, 2021 at 10:19 AM Dave MacFarlane <dave.macfarlane at mcin.ca>
wrote:

> What version of composer are you using?
>
> Composer 2 (which was backwards incompatible) came out at around the same
> time as LORIS 23.
>
> If you're using composer 2 you can try `composer self-update 1.10.17` to
> downgrade and then try the
> composer install again.
>
> On Thu, Feb 4, 2021 at 6:00 PM Tom Beaudry <waveflux at gmail.com> wrote:
>
>> Hey Shen,
>>
>> Sadly it's the same error.
>>
>> Tom
>>
>> On Thu, Feb 4, 2021 at 4:39 PM Shen Wang <wangshen.mcin at gmail.com> wrote:
>>
>>> Hi Tom,
>>> Try "composer self-update --snapshot" or "composer self-update
>>> --stable".
>>> Please let me know the result.
>>> Best
>>> Shen
>>>
>>> On Thu, 4 Feb 2021 at 16:27, Tom Beaudry <waveflux at gmail.com> wrote:
>>>
>>>> Hey Shen,
>>>>
>>>> I followed your instructions and can confirm i'm using php 7.4:
>>>> https://docs.google.com/document/d/1QppFZ8MtKoMRltiIQidFDslfVwriuS9cpfuZN49nOZ8/edit?usp=sharing
>>>>
>>>> composer install still fails:
>>>>
>>>>   [ErrorException]
>>>>   Trying to access array offset on value of type null
>>>>
>>>> Thanks!
>>>> Tom
>>>>
>>>> On Thu, Feb 4, 2021 at 4:04 PM Shen Wang <wangshen.mcin at gmail.com>
>>>> wrote:
>>>>
>>>>> Hi Tom,
>>>>> It is very helpful, it means you need to do "composer install" again.
>>>>> if it not works for you then try these steps for Centos.
>>>>> sudo yum-config-manager --disable remi-php80
>>>>> sudo yum-config-manager --enable remi-php74
>>>>> sudo systemctl restart httpd sudo systemctl status httpd
>>>>> /var/www/loris/htdocs$ echo "<?php phpinfo(); ?>" >> test.php
>>>>> Using test.php to check your PHP version in your brower.
>>>>> Best
>>>>> Shen
>>>>>
>>>>>
>>>>>
>>>>>
>>>>>
>>>>> On Thu, 4 Feb 2021 at 15:55, Tom Beaudry <waveflux at gmail.com> wrote:
>>>>>
>>>>>> Hey Shen,
>>>>>>
>>>>>> I checked the apache log and the error is different now:
>>>>>>
>>>>>> [Thu Feb 04 15:54:16.131158 2021] [php7:warn] [pid 5215] [client
>>>>>> 172.16.253.6:62349] PHP Warning:
>>>>>>  require_once(/var/www/loris/htdocs/../vendor/autoload.php): failed to open
>>>>>> stream: No such file or directory in /var/www/loris/htdocs/index.php on
>>>>>> line 18
>>>>>> [Thu Feb 04 15:54:16.131215 2021] [php7:error] [pid 5215] [client
>>>>>> 172.16.253.6:62349] PHP Fatal error:  require_once(): Failed opening
>>>>>> required '/var/www/loris/htdocs/../vendor/autoload.php'
>>>>>> (include_path='.:/usr/share/php:/var/www/loris/project/libraries:/var/www/loris/php/libraries')
>>>>>> in /var/www/loris/htdocs/index.php on line 18
>>>>>>
>>>>>> I'm not sure if that helps figure out what's wrong.
>>>>>>
>>>>>> Thanks again!
>>>>>> Tom
>>>>>>
>>>>>> On Thu, Feb 4, 2021 at 3:45 PM Tom Beaudry <waveflux at gmail.com>
>>>>>> wrote:
>>>>>>
>>>>>>> Hi Shen,
>>>>>>>
>>>>>>> My productions server is CentOS.
>>>>>>>
>>>>>>> If i check what version of php i'm using:
>>>>>>>
>>>>>>> [lorisadmin at loris loris]$ rpm -qa | grep php
>>>>>>> php-json-7.4.15-1.el7.remi.x86_64
>>>>>>> php-pear-1.10.12-5.el7.remi.noarch
>>>>>>> php-7.4.15-1.el7.remi.x86_64
>>>>>>> php-devel-7.4.15-1.el7.remi.x86_64
>>>>>>> php-sodium-7.4.15-1.el7.remi.x86_64
>>>>>>> php-fedora-autoloader-1.0.1-2.el7.noarch
>>>>>>> php-fpm-7.4.15-1.el7.remi.x86_64
>>>>>>> php-gd-7.4.15-1.el7.remi.x86_64
>>>>>>> php-cli-7.4.15-1.el7.remi.x86_64
>>>>>>> php-pdo-7.4.15-1.el7.remi.x86_64
>>>>>>> php-mysqlnd-7.4.15-1.el7.remi.x86_64
>>>>>>> php-bcmath-7.4.15-1.el7.remi.x86_64
>>>>>>> php-xml-7.4.15-1.el7.remi.x86_64
>>>>>>> php-mbstring-7.4.15-1.el7.remi.x86_64
>>>>>>> oniguruma5php-6.9.6-1.el7.remi.x86_64
>>>>>>> php-common-7.4.15-1.el7.remi.x86_64
>>>>>>> php-process-7.4.15-1.el7.remi.x86_64
>>>>>>> php-pecl-mcrypt-1.0.4-1.el7.remi.7.4.x86_64
>>>>>>>
>>>>>>> They are all showing up as 7.4.
>>>>>>>
>>>>>>> Thanks!
>>>>>>> Tom
>>>>>>>
>>>>>>> On Thu, Feb 4, 2021 at 3:37 PM Shen Wang <wangshen.mcin at gmail.com>
>>>>>>> wrote:
>>>>>>>
>>>>>>>> Hi Tom,
>>>>>>>> If you got same error like "Deprecated: Required parameter
>>>>>>>> $ignoreFilters follows optional parameter $packageName " ,
>>>>>>>> It seems like you are still using PHP 8. After downgraded to PHP
>>>>>>>> 7.4, you need to install PHP 7.4 dependencies as well.
>>>>>>>> Try these steps :
>>>>>>>>
>>>>>>>>    1. sudo apt-get install -y php7.4 php7.4-mysql php7.4-xml
>>>>>>>>    php7.4-json php7.4-mbstring php7.4-gd php-ast
>>>>>>>>    2. sudo apt-get install -y composer
>>>>>>>>    3. sudo apt-get install -y libapache2-mod-php7.4
>>>>>>>>    4. sudo a2dismod php8.0
>>>>>>>>    5. sudo a2enmod php7.4
>>>>>>>>    6. sudo service apache2 restart
>>>>>>>>
>>>>>>>> 7, make clean
>>>>>>>> 8, make
>>>>>>>> Good luck.
>>>>>>>> Best
>>>>>>>> Shen
>>>>>>>>
>>>>>>>>
>>>>>>>> On Thu, 4 Feb 2021 at 15:05, Tom Beaudry <waveflux at gmail.com>
>>>>>>>> wrote:
>>>>>>>>
>>>>>>>>> Hey Shen,
>>>>>>>>>
>>>>>>>>> I downgraded to php 7.4 and get the same results.
>>>>>>>>>
>>>>>>>>> What can i try next?
>>>>>>>>> Tom
>>>>>>>>>
>>>>>>>>> On Thu, Feb 4, 2021 at 2:01 PM Shen Wang <wangshen.mcin at gmail.com>
>>>>>>>>> wrote:
>>>>>>>>>
>>>>>>>>>> Hi Tom,
>>>>>>>>>> We don't support PHP 8 with Loris yet. We are working on it.  For
>>>>>>>>>> the 23.0-release, you have to use PHP 7.3 or 7.4.
>>>>>>>>>> Best
>>>>>>>>>> Shen
>>>>>>>>>>
>>>>>>>>>> On Thu, 4 Feb 2021 at 13:50, Tom Beaudry <waveflux at gmail.com>
>>>>>>>>>> wrote:
>>>>>>>>>>
>>>>>>>>>>> Hey Shen,
>>>>>>>>>>>
>>>>>>>>>>> Unfortunately it didn't work.  Here's the output:
>>>>>>>>>>> https://pastebin.com/raw/ZQjPuAG1
>>>>>>>>>>>
>>>>>>>>>>> I'm using php8.
>>>>>>>>>>>
>>>>>>>>>>> Thanks,
>>>>>>>>>>> Tom
>>>>>>>>>>>
>>>>>>>>>>> On Thu, Feb 4, 2021 at 1:40 PM Shen Wang <
>>>>>>>>>>> wangshen.mcin at gmail.com> wrote:
>>>>>>>>>>>
>>>>>>>>>>>> Hi Tom,
>>>>>>>>>>>> You are welcome. I think that you need to remove all the vendor
>>>>>>>>>>>> files.
>>>>>>>>>>>> Try  step 1: "make clean"    (delete all the vendor and
>>>>>>>>>>>> node_modules)
>>>>>>>>>>>>        step 2: "make"             ( run composer install and
>>>>>>>>>>>> npm install ...)
>>>>>>>>>>>> If it still can't work, could you tell me which PHP version are
>>>>>>>>>>>> you using?
>>>>>>>>>>>> Best
>>>>>>>>>>>> Shen
>>>>>>>>>>>>
>>>>>>>>>>>> On Thu, 4 Feb 2021 at 13:29, Tom Beaudry <waveflux at gmail.com>
>>>>>>>>>>>> wrote:
>>>>>>>>>>>>
>>>>>>>>>>>>> Hi Shen,
>>>>>>>>>>>>>
>>>>>>>>>>>>> Thanks for the answer:  Composer install gives me the
>>>>>>>>>>>>> following error:
>>>>>>>>>>>>>
>>>>>>>>>>>>> [lorisadmin at loris loris]$ composer install
>>>>>>>>>>>>> PHP Deprecated:  Required parameter $ignoreFilters follows
>>>>>>>>>>>>> optional parameter $packageName in
>>>>>>>>>>>>> phar:///usr/local/bin/composer/src/Composer/Command/ArchiveCommand.php on
>>>>>>>>>>>>> line 97
>>>>>>>>>>>>>
>>>>>>>>>>>>> Deprecated: Required parameter $ignoreFilters follows optional
>>>>>>>>>>>>> parameter $packageName in
>>>>>>>>>>>>> phar:///usr/local/bin/composer/src/Composer/Command/ArchiveCommand.php on
>>>>>>>>>>>>> line 97
>>>>>>>>>>>>> Deprecation Notice: Required parameter $path follows optional
>>>>>>>>>>>>> parameter $schema in
>>>>>>>>>>>>> phar:///usr/local/bin/composer/vendor/justinrainbow/json-schema/src/JsonSchema/Constraints/UndefinedConstraint.php:53
>>>>>>>>>>>>> Deprecation Notice: Required parameter $path follows optional
>>>>>>>>>>>>> parameter $schema in
>>>>>>>>>>>>> phar:///usr/local/bin/composer/vendor/justinrainbow/json-schema/src/JsonSchema/Constraints/UndefinedConstraint.php:97
>>>>>>>>>>>>>
>>>>>>>>>>>>>
>>>>>>>>>>>>>   [ErrorException]
>>>>>>>>>>>>>   Trying to access array offset on value of type null
>>>>>>>>>>>>>
>>>>>>>>>>>>> Best,
>>>>>>>>>>>>> Tom
>>>>>>>>>>>>>
>>>>>>>>>>>>>
>>>>>>>>>>>>> On Thu, Feb 4, 2021 at 1:13 PM Shen Wang <
>>>>>>>>>>>>> wangshen.mcin at gmail.com> wrote:
>>>>>>>>>>>>>
>>>>>>>>>>>>>> Hi Tom,
>>>>>>>>>>>>>> You need to re-run " composer install " to solve this issue.
>>>>>>>>>>>>>> Good Luck.
>>>>>>>>>>>>>> Best
>>>>>>>>>>>>>> Shen
>>>>>>>>>>>>>>
>>>>>>>>>>>>>> On Thu, 4 Feb 2021 at 13:01, Tom Beaudry <waveflux at gmail.com>
>>>>>>>>>>>>>> wrote:
>>>>>>>>>>>>>>
>>>>>>>>>>>>>>> Hey Guys,
>>>>>>>>>>>>>>>
>>>>>>>>>>>>>>> I decided to upgrade LORIS v22 to v23 and I ran into this
>>>>>>>>>>>>>>> apache error when i navigate to the homepage in my web browser:
>>>>>>>>>>>>>>>
>>>>>>>>>>>>>>> [Thu Feb 04 12:52:22.608901 2021] [php7:warn] [pid 5215]
>>>>>>>>>>>>>>> [client 172.16.253.6:62122] PHP Warning:  session_start():
>>>>>>>>>>>>>>> Setting option 'cookie_samesite' failed in
>>>>>>>>>>>>>>> /var/www/loris/php/libraries/NDB_Client.class.inc on line 147
>>>>>>>>>>>>>>>
>>>>>>>>>>>>>>> [Thu Feb 04 12:52:22.610434 2021] [php7:error] [pid 5215]
>>>>>>>>>>>>>>> [client 172.16.253.6:62122] PHP Fatal error*:  Uncaught
>>>>>>>>>>>>>>> Error: Class 'Laminas\\Diactoros\\ServerRequestFactory'*
>>>>>>>>>>>>>>> not found in /var/www/loris/htdocs/index.php:35\nStack trace:\n#0 {main}\n
>>>>>>>>>>>>>>>  thrown in /var/www/loris/htdocs/index.php on line 35
>>>>>>>>>>>>>>>
>>>>>>>>>>>>>>>
>>>>>>>>>>>>>>> It seems that the server request is failing:
>>>>>>>>>>>>>>>
>>>>>>>>>>>>>>> $serverrequest = \Laminas\Diactoros\ServerRequestFactory::
>>>>>>>>>>>>>>> fromGlobals();
>>>>>>>>>>>>>>> 36
>>>>>>>>>>>>>>> <https://github.com/aces/Loris/blob/11e6780c0d0e2f4e33ee915f8258f9222c314892/htdocs/index.php#L36>
>>>>>>>>>>>>>>> Any help would be greatly appreciated!
>>>>>>>>>>>>>>> Tom
>>>>>>>>>>>>>>> _______________________________________________
>>>>>>>>>>>>>>> Loris-dev mailing list
>>>>>>>>>>>>>>> Loris-dev at bic.mni.mcgill.ca
>>>>>>>>>>>>>>> https://mailman.bic.mni.mcgill.ca/mailman/listinfo/loris-dev
>>>>>>>>>>>>>>>
>>>>>>>>>>>>>>
>>>>>>>>>>>>>>
>>>>>>>>>>>>>> --
>>>>>>>>>>>>>> Shen Wang
>>>>>>>>>>>>>> Loris <https://github.com/aces/Loris>  Developer
>>>>>>>>>>>>>> Montreal Neurological Institute
>>>>>>>>>>>>>> McGill University
>>>>>>>>>>>>>>
>>>>>>>>>>>>>>
>>>>>>>>>>>>
>>>>>>>>>>>> --
>>>>>>>>>>>> Shen Wang
>>>>>>>>>>>> Loris <https://github.com/aces/Loris>  Developer
>>>>>>>>>>>> Montreal Neurological Institute
>>>>>>>>>>>> McGill University
>>>>>>>>>>>>
>>>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>> --
>>>>>>>>>> Shen Wang
>>>>>>>>>> Loris <https://github.com/aces/Loris>  Developer
>>>>>>>>>> Montreal Neurological Institute
>>>>>>>>>> McGill University
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>
>>>>>>>> --
>>>>>>>> Shen Wang
>>>>>>>> Loris <https://github.com/aces/Loris>  Developer
>>>>>>>> Montreal Neurological Institute
>>>>>>>> McGill University
>>>>>>>>
>>>>>>>>
>>>>>
>>>>> --
>>>>> Shen Wang
>>>>> Loris <https://github.com/aces/Loris>  Developer
>>>>> Montreal Neurological Institute
>>>>> McGill University
>>>>>
>>>>>
>>>
>>> --
>>> Shen Wang
>>> Loris <https://github.com/aces/Loris>  Developer
>>> Montreal Neurological Institute
>>> McGill University
>>>
>>> _______________________________________________
>> Loris-dev mailing list
>> Loris-dev at bic.mni.mcgill.ca
>> https://mailman.bic.mni.mcgill.ca/mailman/listinfo/loris-dev
>>
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mailman.bic.mni.mcgill.ca/pipermail/loris-dev/attachments/20210208/5249a5c8/attachment-0001.html>

More information about the Loris-dev mailing list