[Loris-dev] upgrading LORIS v22 - v23 error

Thu Feb 4 18:00:09 EST 2021

Hey Shen,

Sadly it's the same error.

Tom

On Thu, Feb 4, 2021 at 4:39 PM Shen Wang <wangshen.mcin at gmail.com> wrote:

> Hi Tom,
> Try "composer self-update --snapshot" or "composer self-update --stable".
> Please let me know the result.
> Best
> Shen
>
> On Thu, 4 Feb 2021 at 16:27, Tom Beaudry <waveflux at gmail.com> wrote:
>
>> Hey Shen,
>>
>> I followed your instructions and can confirm i'm using php 7.4:
>> https://docs.google.com/document/d/1QppFZ8MtKoMRltiIQidFDslfVwriuS9cpfuZN49nOZ8/edit?usp=sharing
>>
>> composer install still fails:
>>
>>   [ErrorException]
>>   Trying to access array offset on value of type null
>>
>> Thanks!
>> Tom
>>
>> On Thu, Feb 4, 2021 at 4:04 PM Shen Wang <wangshen.mcin at gmail.com> wrote:
>>
>>> Hi Tom,
>>> It is very helpful, it means you need to do "composer install" again.
>>> if it not works for you then try these steps for Centos.
>>> sudo yum-config-manager --disable remi-php80
>>> sudo yum-config-manager --enable remi-php74
>>> sudo systemctl restart httpd sudo systemctl status httpd
>>> /var/www/loris/htdocs$ echo "<?php phpinfo(); ?>" >> test.php
>>> Using test.php to check your PHP version in your brower.
>>> Best
>>> Shen
>>>
>>>
>>>
>>>
>>>
>>> On Thu, 4 Feb 2021 at 15:55, Tom Beaudry <waveflux at gmail.com> wrote:
>>>
>>>> Hey Shen,
>>>>
>>>> I checked the apache log and the error is different now:
>>>>
>>>> [Thu Feb 04 15:54:16.131158 2021] [php7:warn] [pid 5215] [client
>>>> 172.16.253.6:62349] PHP Warning:
>>>>  require_once(/var/www/loris/htdocs/../vendor/autoload.php): failed to open
>>>> stream: No such file or directory in /var/www/loris/htdocs/index.php on
>>>> line 18
>>>> [Thu Feb 04 15:54:16.131215 2021] [php7:error] [pid 5215] [client
>>>> 172.16.253.6:62349] PHP Fatal error:  require_once(): Failed opening
>>>> required '/var/www/loris/htdocs/../vendor/autoload.php'
>>>> (include_path='.:/usr/share/php:/var/www/loris/project/libraries:/var/www/loris/php/libraries')
>>>> in /var/www/loris/htdocs/index.php on line 18
>>>>
>>>> I'm not sure if that helps figure out what's wrong.
>>>>
>>>> Thanks again!
>>>> Tom
>>>>
>>>> On Thu, Feb 4, 2021 at 3:45 PM Tom Beaudry <waveflux at gmail.com> wrote:
>>>>
>>>>> Hi Shen,
>>>>>
>>>>> My productions server is CentOS.
>>>>>
>>>>> If i check what version of php i'm using:
>>>>>
>>>>> [lorisadmin at loris loris]$ rpm -qa | grep php
>>>>> php-json-7.4.15-1.el7.remi.x86_64
>>>>> php-pear-1.10.12-5.el7.remi.noarch
>>>>> php-7.4.15-1.el7.remi.x86_64
>>>>> php-devel-7.4.15-1.el7.remi.x86_64
>>>>> php-sodium-7.4.15-1.el7.remi.x86_64
>>>>> php-fedora-autoloader-1.0.1-2.el7.noarch
>>>>> php-fpm-7.4.15-1.el7.remi.x86_64
>>>>> php-gd-7.4.15-1.el7.remi.x86_64
>>>>> php-cli-7.4.15-1.el7.remi.x86_64
>>>>> php-pdo-7.4.15-1.el7.remi.x86_64
>>>>> php-mysqlnd-7.4.15-1.el7.remi.x86_64
>>>>> php-bcmath-7.4.15-1.el7.remi.x86_64
>>>>> php-xml-7.4.15-1.el7.remi.x86_64
>>>>> php-mbstring-7.4.15-1.el7.remi.x86_64
>>>>> oniguruma5php-6.9.6-1.el7.remi.x86_64
>>>>> php-common-7.4.15-1.el7.remi.x86_64
>>>>> php-process-7.4.15-1.el7.remi.x86_64
>>>>> php-pecl-mcrypt-1.0.4-1.el7.remi.7.4.x86_64
>>>>>
>>>>> They are all showing up as 7.4.
>>>>>
>>>>> Thanks!
>>>>> Tom
>>>>>
>>>>> On Thu, Feb 4, 2021 at 3:37 PM Shen Wang <wangshen.mcin at gmail.com>
>>>>> wrote:
>>>>>
>>>>>> Hi Tom,
>>>>>> If you got same error like "Deprecated: Required parameter
>>>>>> $ignoreFilters follows optional parameter $packageName " ,
>>>>>> It seems like you are still using PHP 8. After downgraded to PHP
>>>>>> 7.4, you need to install PHP 7.4 dependencies as well.
>>>>>> Try these steps :
>>>>>>
>>>>>>    1. sudo apt-get install -y php7.4 php7.4-mysql php7.4-xml
>>>>>>    php7.4-json php7.4-mbstring php7.4-gd php-ast
>>>>>>    2. sudo apt-get install -y composer
>>>>>>    3. sudo apt-get install -y libapache2-mod-php7.4
>>>>>>    4. sudo a2dismod php8.0
>>>>>>    5. sudo a2enmod php7.4
>>>>>>    6. sudo service apache2 restart
>>>>>>
>>>>>> 7, make clean
>>>>>> 8, make
>>>>>> Good luck.
>>>>>> Best
>>>>>> Shen
>>>>>>
>>>>>>
>>>>>> On Thu, 4 Feb 2021 at 15:05, Tom Beaudry <waveflux at gmail.com> wrote:
>>>>>>
>>>>>>> Hey Shen,
>>>>>>>
>>>>>>> I downgraded to php 7.4 and get the same results.
>>>>>>>
>>>>>>> What can i try next?
>>>>>>> Tom
>>>>>>>
>>>>>>> On Thu, Feb 4, 2021 at 2:01 PM Shen Wang <wangshen.mcin at gmail.com>
>>>>>>> wrote:
>>>>>>>
>>>>>>>> Hi Tom,
>>>>>>>> We don't support PHP 8 with Loris yet. We are working on it.  For
>>>>>>>> the 23.0-release, you have to use PHP 7.3 or 7.4.
>>>>>>>> Best
>>>>>>>> Shen
>>>>>>>>
>>>>>>>> On Thu, 4 Feb 2021 at 13:50, Tom Beaudry <waveflux at gmail.com>
>>>>>>>> wrote:
>>>>>>>>
>>>>>>>>> Hey Shen,
>>>>>>>>>
>>>>>>>>> Unfortunately it didn't work.  Here's the output:
>>>>>>>>> https://pastebin.com/raw/ZQjPuAG1
>>>>>>>>>
>>>>>>>>> I'm using php8.
>>>>>>>>>
>>>>>>>>> Thanks,
>>>>>>>>> Tom
>>>>>>>>>
>>>>>>>>> On Thu, Feb 4, 2021 at 1:40 PM Shen Wang <wangshen.mcin at gmail.com>
>>>>>>>>> wrote:
>>>>>>>>>
>>>>>>>>>> Hi Tom,
>>>>>>>>>> You are welcome. I think that you need to remove all the vendor
>>>>>>>>>> files.
>>>>>>>>>> Try  step 1: "make clean"    (delete all the vendor and
>>>>>>>>>> node_modules)
>>>>>>>>>>        step 2: "make"             ( run composer install and npm
>>>>>>>>>> install ...)
>>>>>>>>>> If it still can't work, could you tell me which PHP version are
>>>>>>>>>> you using?
>>>>>>>>>> Best
>>>>>>>>>> Shen
>>>>>>>>>>
>>>>>>>>>> On Thu, 4 Feb 2021 at 13:29, Tom Beaudry <waveflux at gmail.com>
>>>>>>>>>> wrote:
>>>>>>>>>>
>>>>>>>>>>> Hi Shen,
>>>>>>>>>>>
>>>>>>>>>>> Thanks for the answer:  Composer install gives me the following
>>>>>>>>>>> error:
>>>>>>>>>>>
>>>>>>>>>>> [lorisadmin at loris loris]$ composer install
>>>>>>>>>>> PHP Deprecated:  Required parameter $ignoreFilters follows
>>>>>>>>>>> optional parameter $packageName in
>>>>>>>>>>> phar:///usr/local/bin/composer/src/Composer/Command/ArchiveCommand.php on
>>>>>>>>>>> line 97
>>>>>>>>>>>
>>>>>>>>>>> Deprecated: Required parameter $ignoreFilters follows optional
>>>>>>>>>>> parameter $packageName in
>>>>>>>>>>> phar:///usr/local/bin/composer/src/Composer/Command/ArchiveCommand.php on
>>>>>>>>>>> line 97
>>>>>>>>>>> Deprecation Notice: Required parameter $path follows optional
>>>>>>>>>>> parameter $schema in
>>>>>>>>>>> phar:///usr/local/bin/composer/vendor/justinrainbow/json-schema/src/JsonSchema/Constraints/UndefinedConstraint.php:53
>>>>>>>>>>> Deprecation Notice: Required parameter $path follows optional
>>>>>>>>>>> parameter $schema in
>>>>>>>>>>> phar:///usr/local/bin/composer/vendor/justinrainbow/json-schema/src/JsonSchema/Constraints/UndefinedConstraint.php:97
>>>>>>>>>>>
>>>>>>>>>>>
>>>>>>>>>>>   [ErrorException]
>>>>>>>>>>>   Trying to access array offset on value of type null
>>>>>>>>>>>
>>>>>>>>>>> Best,
>>>>>>>>>>> Tom
>>>>>>>>>>>
>>>>>>>>>>>
>>>>>>>>>>> On Thu, Feb 4, 2021 at 1:13 PM Shen Wang <
>>>>>>>>>>> wangshen.mcin at gmail.com> wrote:
>>>>>>>>>>>
>>>>>>>>>>>> Hi Tom,
>>>>>>>>>>>> You need to re-run " composer install " to solve this issue.
>>>>>>>>>>>> Good Luck.
>>>>>>>>>>>> Best
>>>>>>>>>>>> Shen
>>>>>>>>>>>>
>>>>>>>>>>>> On Thu, 4 Feb 2021 at 13:01, Tom Beaudry <waveflux at gmail.com>
>>>>>>>>>>>> wrote:
>>>>>>>>>>>>
>>>>>>>>>>>>> Hey Guys,
>>>>>>>>>>>>>
>>>>>>>>>>>>> I decided to upgrade LORIS v22 to v23 and I ran into this
>>>>>>>>>>>>> apache error when i navigate to the homepage in my web browser:
>>>>>>>>>>>>>
>>>>>>>>>>>>> [Thu Feb 04 12:52:22.608901 2021] [php7:warn] [pid 5215]
>>>>>>>>>>>>> [client 172.16.253.6:62122] PHP Warning:  session_start():
>>>>>>>>>>>>> Setting option 'cookie_samesite' failed in
>>>>>>>>>>>>> /var/www/loris/php/libraries/NDB_Client.class.inc on line 147
>>>>>>>>>>>>>
>>>>>>>>>>>>> [Thu Feb 04 12:52:22.610434 2021] [php7:error] [pid 5215]
>>>>>>>>>>>>> [client 172.16.253.6:62122] PHP Fatal error*:  Uncaught
>>>>>>>>>>>>> Error: Class 'Laminas\\Diactoros\\ServerRequestFactory'* not
>>>>>>>>>>>>> found in /var/www/loris/htdocs/index.php:35\nStack trace:\n#0 {main}\n
>>>>>>>>>>>>>  thrown in /var/www/loris/htdocs/index.php on line 35
>>>>>>>>>>>>>
>>>>>>>>>>>>>
>>>>>>>>>>>>> It seems that the server request is failing:
>>>>>>>>>>>>>
>>>>>>>>>>>>> $serverrequest = \Laminas\Diactoros\ServerRequestFactory::
>>>>>>>>>>>>> fromGlobals();
>>>>>>>>>>>>> 36
>>>>>>>>>>>>> <https://github.com/aces/Loris/blob/11e6780c0d0e2f4e33ee915f8258f9222c314892/htdocs/index.php#L36>
>>>>>>>>>>>>> Any help would be greatly appreciated!
>>>>>>>>>>>>> Tom
>>>>>>>>>>>>> _______________________________________________
>>>>>>>>>>>>> Loris-dev mailing list
>>>>>>>>>>>>> Loris-dev at bic.mni.mcgill.ca
>>>>>>>>>>>>> https://mailman.bic.mni.mcgill.ca/mailman/listinfo/loris-dev
>>>>>>>>>>>>>
>>>>>>>>>>>>
>>>>>>>>>>>>
>>>>>>>>>>>> --
>>>>>>>>>>>> Shen Wang
>>>>>>>>>>>> Loris <https://github.com/aces/Loris>  Developer
>>>>>>>>>>>> Montreal Neurological Institute
>>>>>>>>>>>> McGill University
>>>>>>>>>>>>
>>>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>> --
>>>>>>>>>> Shen Wang
>>>>>>>>>> Loris <https://github.com/aces/Loris>  Developer
>>>>>>>>>> Montreal Neurological Institute
>>>>>>>>>> McGill University
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>
>>>>>>>> --
>>>>>>>> Shen Wang
>>>>>>>> Loris <https://github.com/aces/Loris>  Developer
>>>>>>>> Montreal Neurological Institute
>>>>>>>> McGill University
>>>>>>>>
>>>>>>>>
>>>>>>
>>>>>> --
>>>>>> Shen Wang
>>>>>> Loris <https://github.com/aces/Loris>  Developer
>>>>>> Montreal Neurological Institute
>>>>>> McGill University
>>>>>>
>>>>>>
>>>
>>> --
>>> Shen Wang
>>> Loris <https://github.com/aces/Loris>  Developer
>>> Montreal Neurological Institute
>>> McGill University
>>>
>>>
>
> --
> Shen Wang
> Loris <https://github.com/aces/Loris>  Developer
> Montreal Neurological Institute
> McGill University
>
>
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