[Loris-dev] upgrading LORIS v22 - v23 error
Tom Beaudry
waveflux at gmail.com
Thu Feb 4 16:27:37 EST 2021
Hey Shen,
I followed your instructions and can confirm i'm using php 7.4:
https://docs.google.com/document/d/1QppFZ8MtKoMRltiIQidFDslfVwriuS9cpfuZN49nOZ8/edit?usp=sharing
composer install still fails:
[ErrorException]
Trying to access array offset on value of type null
Thanks!
Tom
On Thu, Feb 4, 2021 at 4:04 PM Shen Wang <wangshen.mcin at gmail.com> wrote:
> Hi Tom,
> It is very helpful, it means you need to do "composer install" again.
> if it not works for you then try these steps for Centos.
> sudo yum-config-manager --disable remi-php80
> sudo yum-config-manager --enable remi-php74
> sudo systemctl restart httpd sudo systemctl status httpd
> /var/www/loris/htdocs$ echo "<?php phpinfo(); ?>" >> test.php
> Using test.php to check your PHP version in your brower.
> Best
> Shen
>
>
>
>
>
> On Thu, 4 Feb 2021 at 15:55, Tom Beaudry <waveflux at gmail.com> wrote:
>
>> Hey Shen,
>>
>> I checked the apache log and the error is different now:
>>
>> [Thu Feb 04 15:54:16.131158 2021] [php7:warn] [pid 5215] [client
>> 172.16.253.6:62349] PHP Warning:
>> require_once(/var/www/loris/htdocs/../vendor/autoload.php): failed to open
>> stream: No such file or directory in /var/www/loris/htdocs/index.php on
>> line 18
>> [Thu Feb 04 15:54:16.131215 2021] [php7:error] [pid 5215] [client
>> 172.16.253.6:62349] PHP Fatal error: require_once(): Failed opening
>> required '/var/www/loris/htdocs/../vendor/autoload.php'
>> (include_path='.:/usr/share/php:/var/www/loris/project/libraries:/var/www/loris/php/libraries')
>> in /var/www/loris/htdocs/index.php on line 18
>>
>> I'm not sure if that helps figure out what's wrong.
>>
>> Thanks again!
>> Tom
>>
>> On Thu, Feb 4, 2021 at 3:45 PM Tom Beaudry <waveflux at gmail.com> wrote:
>>
>>> Hi Shen,
>>>
>>> My productions server is CentOS.
>>>
>>> If i check what version of php i'm using:
>>>
>>> [lorisadmin at loris loris]$ rpm -qa | grep php
>>> php-json-7.4.15-1.el7.remi.x86_64
>>> php-pear-1.10.12-5.el7.remi.noarch
>>> php-7.4.15-1.el7.remi.x86_64
>>> php-devel-7.4.15-1.el7.remi.x86_64
>>> php-sodium-7.4.15-1.el7.remi.x86_64
>>> php-fedora-autoloader-1.0.1-2.el7.noarch
>>> php-fpm-7.4.15-1.el7.remi.x86_64
>>> php-gd-7.4.15-1.el7.remi.x86_64
>>> php-cli-7.4.15-1.el7.remi.x86_64
>>> php-pdo-7.4.15-1.el7.remi.x86_64
>>> php-mysqlnd-7.4.15-1.el7.remi.x86_64
>>> php-bcmath-7.4.15-1.el7.remi.x86_64
>>> php-xml-7.4.15-1.el7.remi.x86_64
>>> php-mbstring-7.4.15-1.el7.remi.x86_64
>>> oniguruma5php-6.9.6-1.el7.remi.x86_64
>>> php-common-7.4.15-1.el7.remi.x86_64
>>> php-process-7.4.15-1.el7.remi.x86_64
>>> php-pecl-mcrypt-1.0.4-1.el7.remi.7.4.x86_64
>>>
>>> They are all showing up as 7.4.
>>>
>>> Thanks!
>>> Tom
>>>
>>> On Thu, Feb 4, 2021 at 3:37 PM Shen Wang <wangshen.mcin at gmail.com>
>>> wrote:
>>>
>>>> Hi Tom,
>>>> If you got same error like "Deprecated: Required parameter
>>>> $ignoreFilters follows optional parameter $packageName " ,
>>>> It seems like you are still using PHP 8. After downgraded to PHP 7.4,
>>>> you need to install PHP 7.4 dependencies as well.
>>>> Try these steps :
>>>>
>>>> 1. sudo apt-get install -y php7.4 php7.4-mysql php7.4-xml
>>>> php7.4-json php7.4-mbstring php7.4-gd php-ast
>>>> 2. sudo apt-get install -y composer
>>>> 3. sudo apt-get install -y libapache2-mod-php7.4
>>>> 4. sudo a2dismod php8.0
>>>> 5. sudo a2enmod php7.4
>>>> 6. sudo service apache2 restart
>>>>
>>>> 7, make clean
>>>> 8, make
>>>> Good luck.
>>>> Best
>>>> Shen
>>>>
>>>>
>>>> On Thu, 4 Feb 2021 at 15:05, Tom Beaudry <waveflux at gmail.com> wrote:
>>>>
>>>>> Hey Shen,
>>>>>
>>>>> I downgraded to php 7.4 and get the same results.
>>>>>
>>>>> What can i try next?
>>>>> Tom
>>>>>
>>>>> On Thu, Feb 4, 2021 at 2:01 PM Shen Wang <wangshen.mcin at gmail.com>
>>>>> wrote:
>>>>>
>>>>>> Hi Tom,
>>>>>> We don't support PHP 8 with Loris yet. We are working on it. For the
>>>>>> 23.0-release, you have to use PHP 7.3 or 7.4.
>>>>>> Best
>>>>>> Shen
>>>>>>
>>>>>> On Thu, 4 Feb 2021 at 13:50, Tom Beaudry <waveflux at gmail.com> wrote:
>>>>>>
>>>>>>> Hey Shen,
>>>>>>>
>>>>>>> Unfortunately it didn't work. Here's the output:
>>>>>>> https://pastebin.com/raw/ZQjPuAG1
>>>>>>>
>>>>>>> I'm using php8.
>>>>>>>
>>>>>>> Thanks,
>>>>>>> Tom
>>>>>>>
>>>>>>> On Thu, Feb 4, 2021 at 1:40 PM Shen Wang <wangshen.mcin at gmail.com>
>>>>>>> wrote:
>>>>>>>
>>>>>>>> Hi Tom,
>>>>>>>> You are welcome. I think that you need to remove all the vendor
>>>>>>>> files.
>>>>>>>> Try step 1: "make clean" (delete all the vendor and
>>>>>>>> node_modules)
>>>>>>>> step 2: "make" ( run composer install and npm
>>>>>>>> install ...)
>>>>>>>> If it still can't work, could you tell me which PHP version are
>>>>>>>> you using?
>>>>>>>> Best
>>>>>>>> Shen
>>>>>>>>
>>>>>>>> On Thu, 4 Feb 2021 at 13:29, Tom Beaudry <waveflux at gmail.com>
>>>>>>>> wrote:
>>>>>>>>
>>>>>>>>> Hi Shen,
>>>>>>>>>
>>>>>>>>> Thanks for the answer: Composer install gives me the following
>>>>>>>>> error:
>>>>>>>>>
>>>>>>>>> [lorisadmin at loris loris]$ composer install
>>>>>>>>> PHP Deprecated: Required parameter $ignoreFilters follows
>>>>>>>>> optional parameter $packageName in
>>>>>>>>> phar:///usr/local/bin/composer/src/Composer/Command/ArchiveCommand.php on
>>>>>>>>> line 97
>>>>>>>>>
>>>>>>>>> Deprecated: Required parameter $ignoreFilters follows optional
>>>>>>>>> parameter $packageName in
>>>>>>>>> phar:///usr/local/bin/composer/src/Composer/Command/ArchiveCommand.php on
>>>>>>>>> line 97
>>>>>>>>> Deprecation Notice: Required parameter $path follows optional
>>>>>>>>> parameter $schema in
>>>>>>>>> phar:///usr/local/bin/composer/vendor/justinrainbow/json-schema/src/JsonSchema/Constraints/UndefinedConstraint.php:53
>>>>>>>>> Deprecation Notice: Required parameter $path follows optional
>>>>>>>>> parameter $schema in
>>>>>>>>> phar:///usr/local/bin/composer/vendor/justinrainbow/json-schema/src/JsonSchema/Constraints/UndefinedConstraint.php:97
>>>>>>>>>
>>>>>>>>>
>>>>>>>>> [ErrorException]
>>>>>>>>> Trying to access array offset on value of type null
>>>>>>>>>
>>>>>>>>> Best,
>>>>>>>>> Tom
>>>>>>>>>
>>>>>>>>>
>>>>>>>>> On Thu, Feb 4, 2021 at 1:13 PM Shen Wang <wangshen.mcin at gmail.com>
>>>>>>>>> wrote:
>>>>>>>>>
>>>>>>>>>> Hi Tom,
>>>>>>>>>> You need to re-run " composer install " to solve this issue.
>>>>>>>>>> Good Luck.
>>>>>>>>>> Best
>>>>>>>>>> Shen
>>>>>>>>>>
>>>>>>>>>> On Thu, 4 Feb 2021 at 13:01, Tom Beaudry <waveflux at gmail.com>
>>>>>>>>>> wrote:
>>>>>>>>>>
>>>>>>>>>>> Hey Guys,
>>>>>>>>>>>
>>>>>>>>>>> I decided to upgrade LORIS v22 to v23 and I ran into this apache
>>>>>>>>>>> error when i navigate to the homepage in my web browser:
>>>>>>>>>>>
>>>>>>>>>>> [Thu Feb 04 12:52:22.608901 2021] [php7:warn] [pid 5215] [client
>>>>>>>>>>> 172.16.253.6:62122] PHP Warning: session_start(): Setting
>>>>>>>>>>> option 'cookie_samesite' failed in
>>>>>>>>>>> /var/www/loris/php/libraries/NDB_Client.class.inc on line 147
>>>>>>>>>>>
>>>>>>>>>>> [Thu Feb 04 12:52:22.610434 2021] [php7:error] [pid 5215]
>>>>>>>>>>> [client 172.16.253.6:62122] PHP Fatal error*: Uncaught Error:
>>>>>>>>>>> Class 'Laminas\\Diactoros\\ServerRequestFactory'* not found in
>>>>>>>>>>> /var/www/loris/htdocs/index.php:35\nStack trace:\n#0 {main}\n thrown in
>>>>>>>>>>> /var/www/loris/htdocs/index.php on line 35
>>>>>>>>>>>
>>>>>>>>>>>
>>>>>>>>>>> It seems that the server request is failing:
>>>>>>>>>>>
>>>>>>>>>>> $serverrequest = \Laminas\Diactoros\ServerRequestFactory::
>>>>>>>>>>> fromGlobals();
>>>>>>>>>>> 36
>>>>>>>>>>> <https://github.com/aces/Loris/blob/11e6780c0d0e2f4e33ee915f8258f9222c314892/htdocs/index.php#L36>
>>>>>>>>>>> Any help would be greatly appreciated!
>>>>>>>>>>> Tom
>>>>>>>>>>> _______________________________________________
>>>>>>>>>>> Loris-dev mailing list
>>>>>>>>>>> Loris-dev at bic.mni.mcgill.ca
>>>>>>>>>>> https://mailman.bic.mni.mcgill.ca/mailman/listinfo/loris-dev
>>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>> --
>>>>>>>>>> Shen Wang
>>>>>>>>>> Loris <https://github.com/aces/Loris> Developer
>>>>>>>>>> Montreal Neurological Institute
>>>>>>>>>> McGill University
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>
>>>>>>>> --
>>>>>>>> Shen Wang
>>>>>>>> Loris <https://github.com/aces/Loris> Developer
>>>>>>>> Montreal Neurological Institute
>>>>>>>> McGill University
>>>>>>>>
>>>>>>>>
>>>>>>
>>>>>> --
>>>>>> Shen Wang
>>>>>> Loris <https://github.com/aces/Loris> Developer
>>>>>> Montreal Neurological Institute
>>>>>> McGill University
>>>>>>
>>>>>>
>>>>
>>>> --
>>>> Shen Wang
>>>> Loris <https://github.com/aces/Loris> Developer
>>>> Montreal Neurological Institute
>>>> McGill University
>>>>
>>>>
>
> --
> Shen Wang
> Loris <https://github.com/aces/Loris> Developer
> Montreal Neurological Institute
> McGill University
>
>
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