[Loris-dev] LORIS Error: The target directory does not contain a single DICOM file.
Morales Pinzon, Alfredo
AMORALESPINZON at bwh.harvard.edu
Mon Nov 25 10:02:32 EST 2019
Dear LorisDev team,
I am batch uploading images to imaging visits using the script batch_uploads_imageuploader but for some images I get the following error:
The target directory does not contain a single DICOM file.
I had seen this error previously due to missing dicom fields like StudyID (0020,0010) and ImagePositionPatient (0020,0032). However, after checking these particular dicom fields and setting StudyID it to '0' I am still getting the same error. What other dicom fields should I check?
Is there a log where I can exactly find the error? Does the "StudyInstanceUID" need to have a value?
I'm pasting the dcmdump of a dicom at the end of this email in case this might help figuring out what is the issue.
I am using LORIS v at 20.1.1.
Thank you in advance for your help.
Best regards,
Alfredo.
--------------------------------------------------------------------------------------
# Dicom-File-Format
# Dicom-Meta-Information-Header
# Used TransferSyntax: Little Endian Explicit
(0002,0000) UL 230 # 4, 1 FileMetaInformationGroupLength
(0002,0001) OB 00\01 # 2, 1 FileMetaInformationVersion
(0002,0002) UI =MRImageStorage # 26, 1 MediaStorageSOPClassUID
(0002,0003) UI [1.2.826.0.1.3680043.2.1125.1.62497394598874749597838823223385071] # 64, 1 MediaStorageSOPInstanceUID
(0002,0010) UI =LittleEndianImplicit # 18, 1 TransferSyntaxUID
(0002,0012) UI [1.2.276.0.7230010.3.0.3.6.0] # 28, 1 ImplementationClassUID
(0002,0013) SH [OFFIS_DCMTK_360] # 16, 1 ImplementationVersionName
(0002,0016) AE [GDCM/ITK 3.17.0] # 16, 1 SourceApplicationEntityTitle
# Dicom-Data-Set
# Used TransferSyntax: Little Endian Implicit
(0008,0008) CS [DERIVED\SECONDARY] # 18, 2 ImageType
(0008,0016) UI =MRImageStorage # 26, 1 SOPClassUID
(0008,0018) UI [1.2.826.0.1.3680043.2.1125.1.62497394598874749597838823223385071] # 64, 1 SOPInstanceUID
(0008,0020) DA [20000101] # 8, 1 StudyDate
(0008,0021) DA [20000101] # 8, 1 SeriesDate
(0008,0022) DA [20000101] # 8, 1 AcquisitionDate
(0008,0030) TM (no value available) # 0, 0 StudyTime
(0008,0031) TM [085517] # 6, 1 SeriesTime
(0008,0032) TM [085517] # 6, 1 AcquisitionTime
(0008,0060) CS [MR] # 2, 1 Modality
(0008,0070) LO [AAABBBCCC] # 6, 1 Manufacturer
(0008,0104) LO [Anonymized] # 10, 1 CodeMeaning
(0008,103e) LO [t1c] # 4, 1 SeriesDescription
(0008,1090) LO [nifti2dicom] # 12, 1 ManufacturerModelName
(0010,0010) PN [10041] # 6, 1 PatientName
(0010,0020) LO [10041] # 6, 1 PatientID
(0010,0021) LO [Anonymized] # 10, 1 IssuerOfPatientID
(0010,0030) DA [19650101] # 8, 1 PatientBirthDate
(0010,0040) CS [Anonymized] # 10, 1 PatientSex
(0010,1010) AS [Anonymized] # 10, 1 PatientAge
(0010,1030) DS (no value available) # 0, 0 PatientWeight
(0010,2150) LO [Anonymized] # 10, 1 CountryOfResidence
(0010,2152) LO [Anonymized] # 10, 1 RegionOfResidence
(0010,21f0) LO [Anonymized] # 10, 1 PatientReligiousPreference
(0012,0050) LO [baseline] # 8, 1 ClinicalTrialTimePointID
(0012,0062) CS [Yes] # 4, 1 PatientIdentityRemoved
(0012,0063) LO [Genentech] # 10, 1 DeidentificationMethod
(0018,0050) DS [3] # 2, 1 SliceThickness
(0018,0088) DS [3] # 2, 1 SpacingBetweenSlices
(0020,000d) UI (no value available) # 0, 0 StudyInstanceUID
(0020,000e) UI [1.2.826.0.1.3680043.2.1143.2737712182581015462892759360372011946] # 64, 1 SeriesInstanceUID
(0020,0010) SH [0] # 2, 1 StudyID
(0020,0011) IS [901] # 4, 1 SeriesNumber
(0020,0012) IS [1] # 2, 1 AcquisitionNumber
(0020,0013) IS [1] # 2, 1 InstanceNumber
(0020,0020) CS [L\R] # 4, 2 PatientOrientation
(0020,0032) DS [-116.48152160645\-118.93698120117\-275.82513427734] # 50, 3 ImagePositionPatient
(0020,0037) DS [1\0\0\0\1\0] # 12, 6 ImageOrientationPatient
(0020,0052) UI [1.2.826.0.1.3680043.2.1143.263896814292546686535778822643473818] # 64, 1 FrameOfReferenceUID
(0028,0002) US 1 # 2, 1 SamplesPerPixel
(0028,0004) CS [MONOCHROME2] # 12, 1 PhotometricInterpretation
(0028,0010) US 256 # 2, 1 Rows
(0028,0011) US 256 # 2, 1 Columns
(0028,0030) DS [1\1] # 4, 2 PixelSpacing
(0028,0100) US 16 # 2, 1 BitsAllocated
(0028,0101) US 16 # 2, 1 BitsStored
(0028,0102) US 15 # 2, 1 HighBit
(0028,0103) US 1 # 2, 1 PixelRepresentation
(0032,1033) LO [Anonymized] # 10, 1 RequestingService
(0040,0280) ST [Anonymized] # 10, 1 CommentsOnThePerformedProcedureStep
(0400,0563) LO [Anonymized] # 10, 1 ModifyingSystem
(0400,0564) LO [Anonymized] # 10, 1 SourceOfPreviousValues
(0400,0565) CS [Anonymized] # 10, 1 ReasonForTheAttributeModification
(1110,21b0) ?? 0a\00 # 2, 1 Unknown Tag & Data
(7fe0,0010) OW 0000\0000\0000\0000\0000\0000\0000\0000\0000\0000\0000\0000\0000... # 131072, 1 PixelData
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mailman.bic.mni.mcgill.ca/pipermail/loris-dev/attachments/20191125/84da579a/attachment-0001.html>
More information about the Loris-dev
mailing list