[Loris-dev] Behavioral Database Workflow

[Muhammad Khan]

Hey Christine,

Thanks for clarifying the BVL QC columns.
To fix the issue of users being able to access instruments through the
statistics module, even though they do not have the access_all_profiles
permission, I copied the following hasAccess function into all the
instruments that I had coded:

function _hasAccess()
>     {
>         // create user object
>         $user =& User::singleton();
>         $timePoint =& TimePoint::singleton($_REQUEST['sessionID']);
>         $candID = $timePoint->getCandID();
>         $candidate =& Candidate::singleton($candID);
>         // check user permissions
>         return ($user->hasPermission('access_all_profiles') ||
> $user->getData('CenterID') == $candidate->getData('CenterID') ||
> $user->getData('CenterID') == $timePoint->getData('CenterID'));
>     }


If the user does not have the access_all_profiles permission and they do
not belong to the participant's center, then they will see the "You do not
have access to this page" error.

On Wed, Apr 26, 2017 at 4:33 PM, Christine Rogers <
christine.rogers at mcgill.ca> wrote:

> HI Muhammed,
> Thanks for your questions;  we'll log these as issues/requests for
> discussion with the team.
>
> i.) What is the purpose of the *BVL QC *& *BVL Exclusion*, and how do I
>> go about utilizing this feature?
>
>
> BVL QC and BVL Exclusion are columns that appear in the Timepoint List
> page, drawn by the Timepoint class from columns in the session table
> <https://github.com/aces/Loris/blob/17.0-dev/SQL/0000-00-00-schema.sql#L1060>.
>
>
> *BVL QC* can be set for a given timepoint by clicking on the timepoint in
> the table, and in the control panel (left sidebar) selecting Visual or
> Hardcopy under "BVL QC Type",  and then selecting "Complete" under "BVL QC
> Status".
> Projects can use this to mark if/when all completed instruments for a
> visit have been inspected against paper originals (hardcopy), or against
> digital or scoring sources ('visual').
> Once both these flags are set within the timepoint, you should see the
> value (visual or hardcopy) in the Timepoint List table, BVL QC column.
> *BVL Exclusion* can be used by custom code or scripts to flag excluded
> datasets (e.g. due to candidate disqualification or data quality
> insufficiency etc), but is not currently set via Loris' front end.
>
> ii.) On the dashboard, I noticed that the number of *Incomplete Forms *that
>> is displayed in the *My Tasks panel* only considers an incomplete form
>> if it is 'In Progress'. If a visit stage is started, the instruments that
>> are populated are not considered to be 'In Progress' until they are opened.
>> So the number displayed on the dashboard excludes unopened instruments.
>> However, in the Data Team Helper module, and the Statistics page, an
>> unopened instrument is considered to be incomplete. Would it not be more
>> appropriate to have the number of *Incomplete Forms* reflect both
>> unopened, and 'In Progress' forms to keep it consistent with the other
>> modules?
>
>
> Thanks for reporting this -- this count should be consistent across
> modules and should include unopened as well as In Progress.
>
> iii.) After a visit has been sent to DCC for approval, is there a way for
>> the study coordinator (admin) to be notified that that visit needs to be
>> verified and approved?
>
>
> This notification would be a good feature to add, and could also appear as
> a notification on the dashboard upon login, e.g. configurable for the site
> coordinator and visible only for their site visits.
>
> Best,
> Christine
>
>
> On Tue, Apr 11, 2017 at 4:03 PM, Muhammad Khan <mukhan at ualberta.ca> wrote:
>
>> Hi LORIS dev community,
>>
>> I had a couple of questions regarding the behavioral database:
>>
>> i.) What is the purpose of the *BVL QC *& *BVL Exclusion*, and how do I
>> go about utilizing this feature?
>>
>> ii.) On the dashboard, I noticed that the number of *Incomplete Forms *that
>> is displayed in the *My Tasks panel* only considers an incomplete form
>> if it is 'In Progress'. If a visit stage is started, the instruments that
>> are populated are not considered to be 'In Progress' until they are opened.
>> So the number displayed on the dashboard excludes unopened instruments.
>> However, in the Data Team Helper module, and the Statistics page, an
>> unopened instrument is considered to be incomplete. Would it not be more
>> appropriate to have the number of *Incomplete Forms* reflect both
>> unopened, and 'In Progress' forms to keep it consistent with the other
>> modules?
>>
>>
>>
>>
>>
>> _______________________________________________
>> Loris-dev mailing list
>> Loris-dev at bic.mni.mcgill.ca
>> http://www.bic.mni.mcgill.ca/mailman/listinfo/loris-dev
>>
>>
>
>
> --
>
> christine.rogers at mcgill.ca
> LORIS data systems | loris.ca
> McGill Centre for Integrative Neuroscience | MCIN.ca
> McConnell Brain Imaging Centre
> Montreal Neurological Institute
> McGill University | Montreal | Canada
>
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