[Loris-dev] how to upload data into LORIS

[Christine Rogers]

Hi Frank,
I'm responding to your email on behalf of the Loris team.

Patient profiles can be created in Loris by clicking on the Candidate menu,
and then clicking on "New Profile" to register a new patient (candidate)
profile.

Patient information (stored in the candidate database table) is linked to
the SNP database table through a common patient ID field called CandID,
which currently appears in both tables.

SNP data can be loaded directly into database tables;  we are working on
certain kinds of genomic uploader functionality for future releases.

In the front-end data table views, columns can be added or removed from
view through the php (and smarty template) code.  Columns can be added to
or deleted from database tables through the MySQL back-end.

Best,
Christine
-- 
LORIS data systems | loris.ca
McGill Centre for Integrative Neuroscience| MCIN.ca
McConnell Brain Imaging Centre
Montreal Neurological Institute
McGill University | Montreal | Canada

On Wed, Dec 9, 2015 at 4:31 PM, Frank Leman <frank1987lee1987 at gmail.com>
wrote:

> Hello David,
>
> I am currently using LORIS database architecture for my application. I
> followed the instructions and installed LORIS in ubuntu as suggested.
>
> Through localhost, I am able to access LORIS's main.php.
>
> I am interested in using SNP under Genomic Browser. I have few doubts,
>
> Where to create initial patients data?
> Where to link the patient information with clinical data (variants)?
> How to  upload the information into SNP for some patients?
> Can I add or delete columns in existing tables?
>
>
> Best,
> Frank
>
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>
>
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