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<div class="">Dear Colleagues,</div>
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</div>
<div class="">As you may know, Sali Farhan and I are gathering information and identifying interested groups to </div>
<div class="">see whom at The Neuro would be interested in a Neuro-wide DRAC (Digital Research Alliance of </div>
<div class="">Canada AKA Compute Canada) platform and portal application. We are coordinating all </div>
<div class="">Neuro applications, to make it as strong as possible.</div>
<div class=""><br class="">
</div>
<div class="">At this stage we are still gathering information on who is interested in participating, what their </div>
<div class="">current and future storage needs are, and what financial support they currently have to do that </div>
<div class="">work.</div>
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</div>
<div class="">Some of you have already contributed and added some information to our spreadsheet:</div>
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</div>
<div class=""><a href="https://docs.google.com/spreadsheets/d/19HV0Z85WYkp-Bu1BhqiHUwWny4NBpVnCIuRDYlHZJsQ/edit#gid=0" class="">https://docs.google.com/spreadsheets/d/19HV0Z85WYkp-Bu1BhqiHUwWny4NBpVnCIuRDYlHZJsQ/edit#gid=0</a></div>
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</div>
<div class="">And I recently corresponded with Sylvain Milot who suggested I should write to this list, to make sure </div>
<div class="">we had all interested parties. At this stage do not worry (too much) about "double dipping” (say Sylvain </div>
<div class="">added numbers, and your numbers are part of those numbers), but do indicate where your storage is, </div>
<div class="">so I can de-convolute all of the BIC storage (for example).</div>
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</div>
<div class="">This Neuro-wide DRAC application will be for all types of data: imaging, genomics, clinical, physiological, </div>
<div class="">human, other organisms, etc.</div>
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<div class="">Even if you have already contributed to the spreadsheet, please re-evaluate and complete added </div>
<div class="">columns (e.g. about grants). </div>
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</div>
<div class="">Also a good idea to include people in your group that could help to complete some of the information </div>
<div class="">in the table. We will follow up with specific people if we have additional information we need.</div>
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<div class="">I will also share a timetable for all of this. The call for application is not out yet, but we expect </div>
<div class="">it early this fall, and we want to be ready ahead of time for a very strong application that we </div>
<div class="">will get reviewed internally by friendly reviewers.</div>
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<div class="">Please do not hesitate to contact Sali or I if you have any questions.</div>
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</div>
<div class="">Thank you ahead of time for your contribution.</div>
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<div class="">@bffo</div>
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<p class="MsoNormal"><b class=""><span style="font-size: 10pt; font-family: Arial, sans-serif;" class="">BF Francis Ouellette</span></b><span style="font-size: 8pt; font-family: Arial, sans-serif;" class=""><br class="">
Executive Director, Neuro Bioinformatics Core Facility<br class="">
TOSI Open Science Officer<br class="">
The Neuro | <b class="">#OpenScience</b><br class="">
3801 University Street, Montreal, Quebec H3A 2B4<br class="">
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<div lang="EN-CA" link="blue" vlink="#954F72" style="caret-color: rgb(0, 0, 0); font-family: Chalkboard; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; word-wrap: break-word;" class="">
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Begin forwarded message:</p>
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<b class="">From:</b><span class="Apple-converted-space"> </span>"Sali Farhan, Dr" <<a href="mailto:sali.farhan@mcgill.ca" style="color: blue; text-decoration: underline;" class="">sali.farhan@mcgill.ca</a>><br class="">
<b class="">Date:</b><span class="Apple-converted-space"> </span>March 31, 2022 at 10:39:02 AM EDT<br class="">
<b class="">To:</b><span class="Apple-converted-space"> </span>"Guy Rouleau, Dr." <<a href="mailto:guy.rouleau@mcgill.ca" style="color: blue; text-decoration: underline;" class="">guy.rouleau@mcgill.ca</a>>, "Patrick Dion, Dr" <<a href="mailto:patrick.a.dion@mcgill.ca" style="color: blue; text-decoration: underline;" class="">patrick.a.dion@mcgill.ca</a>>,
"Ziv Gan-Or, Dr." <<a href="mailto:ziv.gan-or@mcgill.ca" style="color: blue; text-decoration: underline;" class="">ziv.gan-or@mcgill.ca</a>>, "Edward Fon, Dr." <<a href="mailto:ted.fon@mcgill.ca" style="color: blue; text-decoration: underline;" class="">ted.fon@mcgill.ca</a>>,
"Thomas Martin Durcan, Dr" <<a href="mailto:thomas.durcan@mcgill.ca" style="color: blue; text-decoration: underline;" class="">thomas.durcan@mcgill.ca</a>>, "Jo Anne Stratton, Dr" <<a href="mailto:jo.stratton@mcgill.ca" style="color: blue; text-decoration: underline;" class="">jo.stratton@mcgill.ca</a>>,
"Jean-Francois Poulin, Dr" <<a href="mailto:j-francois.poulin@mcgill.ca" style="color: blue; text-decoration: underline;" class="">j-francois.poulin@mcgill.ca</a>>, "Alyson Fournier, Dr." <<a href="mailto:alyson.fournier@mcgill.ca" style="color: blue; text-decoration: underline;" class="">alyson.fournier@mcgill.ca</a>>,
"Harroud, Adil" <<a href="mailto:Adil.Harroud@ucsf.edu" style="color: blue; text-decoration: underline;" class="">Adil.Harroud@ucsf.edu</a>>, "Jason Karamchandani, Dr" <<a href="mailto:jason.karamchandani@mcgill.ca" style="color: blue; text-decoration: underline;" class="">jason.karamchandani@mcgill.ca</a>>,
"Lydiane Gaborieau, Dr" <<a href="mailto:lydiane.gaborieau@mcgill.ca" style="color: blue; text-decoration: underline;" class="">lydiane.gaborieau@mcgill.ca</a>>, "Annabel Seyller, Ms." <<a href="mailto:annabel.seyller@mcgill.ca" style="color: blue; text-decoration: underline;" class="">annabel.seyller@mcgill.ca</a>><br class="">
<b class="">Cc:</b><span class="Apple-converted-space"> </span>"Dan Spiegelman, Mr" <<a href="mailto:dan.spiegelman@mcgill.ca" style="color: blue; text-decoration: underline;" class="">dan.spiegelman@mcgill.ca</a>>, "Saeid Amiri, Dr" <<a href="mailto:saeid.amiri@mcgill.ca" style="color: blue; text-decoration: underline;" class="">saeid.amiri@mcgill.ca</a>>,
"Georgina Jiménez Ambriz, Dr" <<a href="mailto:georgina.jimenezambriz@mcgill.ca" style="color: blue; text-decoration: underline;" class="">georgina.jimenezambriz@mcgill.ca</a>>, "Francis B F Ouellette, Mr" <<a href="mailto:francis.ouellette@mcgill.ca" style="color: blue; text-decoration: underline;" class="">francis.ouellette@mcgill.ca</a>><br class="">
<b class="">Subject:</b><span class="Apple-converted-space"> </span><b class="">The Neuro Bioinformatics Core's Application for the Compute Canada Research Platforms and Portals Competition</b></p>
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<span style="font-size: 12pt;" class="">Hi all,</span></div>
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<span style="font-size: 12pt;" class="">I hope you're all well,</span></div>
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<span style="font-size: 12pt;" class="">As you know the data we produce at The Neuro continues to grow and we need to expand our storage and computing capabilities accordingly.</span></div>
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<span style="font-size: 12pt;" class="">We plan to apply for the Compute Canada Research Platforms and Portals Competition, which will be available this fall. More information can be found here though this is last year's info and things may change: <a href="https://www.computecanada.ca/research-portal/accessing-resources/resource-allocation-competitions/rpp/" style="color: blue; text-decoration: underline;" class="">https://www.computecanada.ca/research-portal/accessing-resources/resource-allocation-competitions/rpp/</a></span></div>
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<span style="font-size: 12pt;" class="">We would like to make sure we are well prepared and fully understand The Neuro's growing data storage and processing needs. <b class=""><span style="background-color: white;" class="">An important element is whether this
should also be a larger Neuro application and include our imaging and informatics colleagues, which will substantially elevate our success rate but we'll need to work out some of the application details accordingly i.e. who the PI is, co-PIs, etc.</span></b></span></div>
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<b class=""><span style="font-size: 12pt;" class="">What we need from you is:</span></b><span style="font-size: 12pt;" class=""></span></div>
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<span style="font-size: 12pt;" class="">1) Are you interested in the bioinformatics core to store and manage your data or do you prefer to manage and store your own data on your own Compute Canada PI account? (You can keep your account and also store your data
with us).</span></div>
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<span style="font-size: 12pt;" class="">2) How much data do you plan on generating from April 2023-March 2024, and what do you prefer to archive - i.e. raw only vs raw + large processed files (esp alignments).</span></div>
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<span style="font-size: 12pt;" class="">Please feel free to forward this to any or all Neuro PIs generating big data (genomics or transcriptomics), I just included our current users.</span></div>
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<span style="font-size: 12pt;" class="">Many thanks for your collaboration,</span></div>
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<span style="font-size: 12pt;" class="">Sali</span></div>
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<b class=""><span style="font-size: 12pt;" class="">Sali Farhan, PhD</span></b><span style="font-size: 12pt;" class=""></span></div>
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<span style="font-size: 12pt;" class="">Assistant Professor</span></div>
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<span style="font-size: 12pt;" class="">Departments of Neurology and Neurosurgery, and Human Genetics</span></div>
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<span style="font-size: 12pt;" class="">Montreal Neurological Institute and Hospital, McGill University</span></div>
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<span style="font-size: 12pt;" class="">Clinical Molecular Geneticist (<span style="background-color: white;" class="">Clinical Biology Specialist)</span></span></div>
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<span style="font-size: 12pt;" class="">McGill University Health Centre (CUSM)</span></div>
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<span style="font-size: 12pt;" class="">Montréal, QC, H4A 3J1</span></div>
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<span style="font-size: 12pt;" class="">Tel: 514-934-1934, ext. 34857</span></div>
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<span style="font-size: 12pt;" class="">Email:<span class="Apple-converted-space"> </span><a href="mailto:sali.farhan@mcgill.ca" style="color: blue; text-decoration: underline;" class="">sali.farhan@mcgill.ca</a></span></p>
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